| Annotation |
|---|
| Description | jgi|Araly1|487385|fgenesh2_kg.6__519__AT5G05850.1 |
| Sequence |
CTTCTTCTTC TTCTTCTCCA ATTTCCCAAT TGTCTCTTCT CTCAAGCTCT CAACAATGGC GACGGAGCTT AACCCTAAGA ACTTCCCTGT TCTCTCTTAC GTCTTGGATC GTCTCCCTTC CTTCACCGCC AAATCCTCTT CCTCTTCCGA TGTCGACCCA CCACCATCCA AATCCGATCC TTCTTCATCA TCAAACCACT CTATCGAGAT CGTGACTCAG ATGCCTCACT TGGCTCATCC TGATGTTCTT GCCTCCATGA CTAACGCTAT CGCCGACGTT GCTCAGACCC GATCCGTTCT TCGAACCCTA GGACCTAGAC CTGATCACGA AACCGTCGAC AAAGCTCGTG CCAGGCTCCG TGAGATCGAC GCGTCTTTGT CGGAATCTTT CGAAGAGATC GCTCTCTCTC CGAACGATAT TGACGTGGCG GAGAAGGAAC TGAAGAGGAG AGAAGCTGTG GATCAAGAGA AGACTTGGTA TAACTCGATC CTTAAGCTTA ACGAGCTTCA TGAATCTTAT GAGAAGCTTT TGAAAGAAGC AGAGGAGAGG CTCGTGAGGA TCTATGAGTC CGCCGAGAAG AATGCGGCCG CGGTGGCGGA GGAGGAAGCT GCGGTGGTTG AAGTTAATGA AGAGGTTGTC AGTATACTGC AACAAGCTGC GGTGAATCCA TTGGACCGAG TTGATTTGTC TGGTCGGAAA TTGAAATTGC TTCCTGAAGC ATTTGGAAAG ATTCAAGGTC TCCTTGTTCT TAATCTCTAT AACAATCAGC TTGAGGCTAT TCCTGATTCG ATAGCTGGTT TGCAAAACCT TCTCGAACTC GATGTTTCCA CGAATTTTTT AGAGACATTA CCCGATTCGA TCGGTTTATT GTCAAAGTTG AAGATTTTGA ATGTCTCTTG TAACAAACTC ACAACTTTAC CAGATTCCAT CTGCCATTGT GGATCTTTGG TTGTCTTGGA TGCGAGCTAC AACAATCTCA CCTACTTACC AACAAACATT GGATTCGAGC TAGTGAAAGT AGAGAAGCTC TTGATCCATC TCAACAAAAT CAGATCATTA CCAACTTCCA TTGGTGAAAT GAGATCCTTA CGCTACCTCG ATGCACACTT CAACGAACTC AACGGTCTCC CAAATTCTTT CGGGCTGCTC ACGAACCTCG AGTACCTTAA CCTGAGCAGT AACTTCAGCG ATCTCCAAGA TCTACCTGCT TCATTTGGCG ATCTCATAAG CCTCCAAGAA CTCGACTTGA GCAACAACCA GATCCATTCT CTTCCAGACG CTTTTGGCAC GCTCGTGAAC CTGACCAAAC TGAACTTGGA CCAAAACCCG CTCGTGGTCC CGCCTGAGGA AGTCGTGAAA CAAGGCGTGG ATGCGGTTAA AATGTATATG GGTAAGAGAT GGGTCAGTAT GTTGGAAGAG GAAGAGAAGA TGGCGAATAT GAAGGATGAG ATGGATCAGA CAAACACCGA TTGGCTCACC CGAACCACAT CGAAGCTGAA AACGTATGTT ACTGAGGTCT CAGAGTATCT TGGCTCGAAT TCGCCTAGAG ATCCTTACCT TGACCAGCAG CTATGAAATG GCTTTGAGCT TCATTTAACA TTTTCTTGAT GATGTCTGAA GAATCAGTTT CCACTCCAAA GTGATCTTCA GTCTTCAGAT TTCCTTCCGC TG |
| Length | 1672 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2071997.. 2074092 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G05850.1 |
| Description | plant intracellular ras group-related LRR 1 |
| TAIR curator summary | Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen. |
| Alias | [PIRL1][plant intracellular ras group-related LRR 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.8997 |
Ahg477665 | NAC domain containing protein 46 |
| 34.3511 |
Ahg475116 | WRKY family transcription factor |
| 37.4166 |
Ahg493155 | Pollen Ole e 1 allergen and extensin family protein |
| 45.5192 |
Ahg915669 | Glutathione S-transferase family protein |
| 46.1302 |
Ahg935267 | Chitinase family protein |
| 55.0999 |
Ahg483895 | myb domain protein 2 |
| 56.2139 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 58.4038 |
Ahg918583 | Auxin efflux carrier family protein |
| 60.3407 |
Ahg472552 | ferric reduction oxidase 3 |
| 61.1882 |
Ahg487900 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|