Detail



ID : Ahg487448

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487448|fgenesh2_kg.6__582__AT5G06390.1
Sequence
AAAGAAAGTA AACTCTTTCA CCAAAAAAGA AAGAAAATTT ATTGTTCCAT CTTTCTGATA ATCCGATCTT ACAGAGAGAG CTCCATGGGT CGTCGCATCT ATGGTGGCTC CGCCGTCATT CATATCTTTC TTTTCTTCTT CGTCCTAATC TTCTCCGCCG CATCTGCATT ATCCAAGAAC CCGAATCCTT CTTCCGGGTC AGGTCAGATC AACTCCAACT CTGTCCTCGT AGCTCTTCTT GACTCTCGTT ACACTGAGCT AGCTGAGCTC GTCGAGAAAG CTCTTCTCCT CCAGACACTT GAAGACGCTG TTGGTCGTCA CAATATTACC ATTTTTGCCC CTCGCAATGA AGCTCTTGAA CGTGACCTTG ACCCTGAGTT CAAGAGGTTC TTGCTCGAGC CAGGTAATCT CAAATCTCTC CAAACACTCC TAATGTTCCA CATTATACCC AATCGGGTCG GGTTGGACCA ATGGCCTCCA GAAGAATCGG GTCGGGTCAA GCACCACACG CTAGGGAACG ATCAGGTCCA TTTGAGCAAT GGAGAAGGAA AAAAGATGGT TGATCTAGCT GAGATTATCC GACCCGATGA TTTGACCCGA CCCGACGGAT TGATCCACGG GATCGAACGG CTTCTCATTC CTCGCTCCGT TCAAGAAGAT TTCAATCGTC GTCGTAGCCT CCAGTCAATC ACCGCCGTTT TACCCGAAGG AGCTCCTGAA GTTGACCCGA GAACCAACCG TCTTAAGAAA CCTGCAGCTC CAGTCCCCGC CGGATCTCCA CCGGCTCTTC CGATCCAATC CGCCATGGCT CCTGGTCCAT CGCTAGCTCC GGCACCAGCT CCGGGACCTG GAGGCAAGCA GCACCACTTC GACGGTGAAG CTCAAGTCAA AGATTTCATC CACACACTGT TACATTACGG CGGTTACAAC GAGATGGCGG ACATTCTCGT GAATCTGACG TCACTCGCGA CGGAGATGGG TCGCTTGGTG TCAGAAGGCT ATGTGTTGAC GGTTCTTGCT CCTAACGACG ACGCTATGGC GAAACTGACG ACGGATCAGT TGAGTGAGCC AGGAGCACCG GAGCAGATTG TGTATTACCA TATTATCCCT GAGTATCAAA CGGAGGAGAG TATGTACAAT TCTGTTAGGA GATTTGGGAA GGTGAAGTTT GATACGCTGC GCTTTCCTCA TAAGGTTGCG GCTAAGGAAG CTGACGGTTC GGTTAAGTTT GGTGACGGTG AAAAGTCAGC GTATTTGTTC GATCCTGATA TTTATACCGA TGGTCGAATT TCGGTTCAAG GGATTGATGG TGTTTTGTTC CCTCAAGAGG AGGAGATTGT TGAATCGGTT AAGAAACCGG TTAAGAAAGT TGTTCAGCCG AGAAGAGGGA AATTGTTGGA AGTAGCCTGT AGCATGCTTG GTGCTTTTGG CAAGGAAACT TATCTCAGCA AATGCCGGTG AATTCGCAAA CCCGCCAAAG AATTGACGTA AACACATTCA AAAAGCTGAT TGAAGGTTGT TTTAAAAAAT TTTTTTCTTT TTTTAAATAT ATTTTGGGGG GGGGGGGGGG GGTGTTTGGT CTTGGATTAT GAATACTGTA ATTAGATTAT ATCAATCATT TTTTAATTAA TTTGGTGGTG TATGAGAATG AGAGTACAAT AAATAAAGGA TTTGTTGTTT TTGCCTTTTT GGAGTCCTTA GCTTTTACTG TGGGGAAAGT ATAATGGTAA GAGAATAATT AAATTATTAG ATGTCTCTGA CTTAAGTATT TTGTGAGAAT GTAATATAAT TATTCTCGTG GACATGGGAA ATGAGTTGGC TCAGGCTGTG TTTGTTGATT ATTGGAGGAA AAACACAAAC TTAGCTGTCT TTGTGAGAAA TCTCAAGTCT TAATACTGAA GTTGTCTAAA TTTTGTTTTT C 
Length1921
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2317036.. 2319956
Download Sequence
A.thaliana
AGI-codeAT5G06390.1
DescriptionFASCICLIN-like arabinogalactan protein 17 precursor
TAIR curator summary
Alias[FLA17][FASCICLIN-like arabinogalactan protein 17 precursor]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg901436 FASCICLIN-like arabinogalactan protein 16 precursor
15.6205 Ahg945946 SKU5 similar 4
15.8745 Ahg497154 FASCICLIN-like arabinogalactan 2
16.3095 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
20.445 Ahg488102 CCCH-type zinc finger protein with ARM repeat domain
21.3073 Ahg941374 Protein kinase superfamily protein
21.4243 Ahg926953 glycosyl hydrolase 9B7
22.5832 Ahg488029
23.9583 Ahg490872 arabinogalactan protein 18
26.8328 Ahg484603 Peroxidase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression