Detail



ID : Ahg487468

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487468|fgenesh2_kg.6__602__AT5G06580.1
Sequence
TCCATGGCTT TCTCTTCGAG GTTCGCTCGT TCTAAAGCAG TTCTCTCTTT TCTCCGGCCT TGTCGTCAGC TCCACTCGAC GCCCAAGTCA ACCGCTGACG TGACCGTGAT TTCTCCGGTG AAGGGTCGCC GGAGACTCCC TACTTGGTGG TCCAGCTCTC TTCTCCCATT GGCTATAGCT GCCTCCGCCA CTTCTTTCGC GTACCTGAAT CTGTCGCATC CTTCTATCAG CGAATCATCG GCTTTGGATT CAAGAGATAT AACTGTTGGT GGGAAAGATA GCACTGAAGC TGTTGTTAAA GGGGAATACA AAGAGGTCCC TAAAGAGCTT ATTACTCATT TGAAAACAAT CCTCGAGGAT AACTTGACAA CTGACTACGA TGAGAGGTAC TTCCATGGGA AGCCCCAGAA CAGTTTTCAC AAGGCAGTGC ACGTTCCTGA TGTTGTTGTT TTCCCTAGGT CTGAAAAAGA AGTCTCCAAG ATTCTTAAAT CCTGCAATGA ATATAAGGTT CCTATTGTAC CATATGGTGG GGCAACATCG ATTGAGGGTC ATACCCTGGC TCCAAAAGGA GGTGTGTGCA TTGACATGTC ATTAATGAAG AGGGTGAAAG CATTACATGT GGAGGATATG GATGTTGTTG TTGAGCCTGG AATTGGTTGG CTGGAGCTTA ATGAATATTT GGAAGAATAC GGTCTATTCT TTCCTCTTGA TCCAGGACCT GGTGCCTCCA TAGGAGGCAT GTGTGCTACG CGTTGCTCTG GCTCTTTAGC TGTAAGGTAT GGAACTATGC GGGACAATGT TATAAGCCTT AAGGTGGTTC TTCCTAATGG AGATGTTGTG AAGACAGCTT CACGTGCCAG AAAGAGTGCT GCAGGATACG ATTTGACTCG CTTGGTGATT GGGAGTGAGG GTACTTTAGG AGTCATTACT GAGATTACTC TCCGGCTTCA GAAAATCCCA CAGCATTCAG TGGTGGCAGT GTGCAATTTC CCTACAGTTA AGGATGCTGC AGACGTTGCA ATTGCCACTA TGATGTCTGG AATACAGGTG TCAAGAGTTG AGCTCCTTGA TGAGGTTCAA ATCAGGGCTA TTAATATGGC AAACGGGAAA AACTTGACCG AAGCACCAAC TCTGATGTTC GAGTTTATAG GAACAGAGGC ATATACACGT GAGCAGACGC AAATTGTTCA GCAGATTGCT TCTAAACACA ATGGATCAGA CTTTATGTTC GCAGAGGAAC CTGAAGCAAA AAAAGAACTC TGGAAGATAA GAAAGGAGGC GCTGTGGGCT TGCTATGCTA TGGCGCCAGG TCATGAAGCA ATGATTACGG ATGTCTGTGT CCCTTTGTCT CACCTTGCAG AACTAATATC AAGATCCAAG AAAGAGCTTG ATGCATCATC GTTGTTGTGT ACCGTTATTG CTCATGCCGG AGATGGAAAC TTTCACACAT GTATTATGTT TGATCCGAGC AAAGAAGAGC AGCGAAGAGA AGCAGAAAGA CTGAACCACT TTATGGTTCA CAGTGCACTG TCCATGGATG GAACATGTAC CGGAGAGCAC GGTGTTGGAA CAGGAAAAAT GAAGTATCTG GAGAAGGAAC TGGGAATAGA AGCACTGCAA ACTATGAAGA GAATCAAGAA AACGTTGGAC CCAAACGATA TCATGAACCC AGGAAAGTTG ATTCCTCCTC ATGTATGTTT CTAAAATGCC TTGTGTGTTC TTCATGTAAC TTTTGTTAAG TTTTCTGTGT AACACAGTTG TATCTTTGGT CTACATTTAA GTACAAAAGA GCTGATGCAA GCAATTGCAT CCGTTTACTT GTGAGCAAGT GGTAATCTAA GGAAAG 
Length1846
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2382542.. 2387536
Download Sequence
A.thaliana
AGI-codeAT5G06580.1
DescriptionFAD-linked oxidases family protein
TAIR curator summaryEncodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg475684 AAR2 protein family
8.88819 Ahg919131 MOS4-associated complex 3A
10.247 Ahg475145 phospholipases;galactolipases
11.3137 Ahg482103 ACT domain-containing small subunit of acetolactate synthase protein
14.2829 Ahg918979 splicing factor Prp18 family protein
18.4932 Ahg939738 exocyst subunit exo70 family protein A1
20.0749 Ahg478314 RAB GTPase homolog E1E
21.0713 Ahg478504
26.2298 Ahg493698 auxin response factor 8
26.9444 Ahg470077 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression