Detail



ID : Ahg478314

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478314|fgenesh2_kg.3__1015__AT3G09900.1
Sequence
TCTCCGGCGA GAAGAGATTT TCCGGGGAAA ATAGCATGAG CTCTCGGTTT TAGTTTGTGT TTAGAAAGAG GACGTAGCTA TTATCTTCTG TGATGGCGGT TGCGCCGGCA AGAGCTCGTT CAGACTATGA TTACCTCATC AAGCTCCTCC TCATCGGCGA TAGCGGTGTG GGAAAAAGTT GCTTGTTACT GCGTTTCTCA GATGATACTT TTACCACGAG TTTCATTACT ACCATTGGAA TCGATTTCAA GATAAGAACA GTCGAACTTG ATGGCAAGCG TATCAAATTG CAGATTTGGG ACACTGCTGG ACAAGAACGT TTTAGAACTA TAACTACAGC ATATTACAGA GGAGCTATGG GTATATTACT CGTCTATGAT GTAACAGATG AGTCATCTTT CAACAACATT AGGAACTGGA TGAAAAACAT TGAGCAGCAT GCGTCCGATA GTGTCAACAA AATATTGGTT GGTAACAAAG CCGACATGGA CGAAAGCAAA AGGGCTGTCC CAACATCAAA GGGACAAGCT CTCGCTGATG AGTATGGAAT CAAATTCTTT GAAACGAGTG CAAAAACAAA CCAGAATGTC GAGCAGGTTT TCCTTTCTAT CGCAAAAGAC ATAAAACAAA GGCTCACAGA AAGCGATACA AAAGCCGAGC CCCAAGGGAT CAAGATCACC AAACAAGATG CTAACAAAGC CTCATCGTCT TCTACAACTG AGAAATCAGC TTGCTGCAGT TATGTTTAGA AGTTCTCTGG ACCTGTTTCT AATCTTTTAC CGTCGTTAAT CTTATTCGCA TCATTCAAGA GATCGTCCTA TGTTCTTATT AGTAGGAGGA TAGACTTAAT TGATGGG 
Length857
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3675079.. 3676906
Download Sequence
A.thaliana
AGI-codeAT3G09900.1
DescriptionRAB GTPase homolog E1E
TAIR curator summary
Alias[ATRAB8E][ATRABE1E][RABE1e][RAB GTPase homolog E1E]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg933625 SHAGGY-related protein kinase dZeta
7.07107 Ahg934539 CAX-interacting protein 2
7.48331 Ahg494250 PPPDE putative thiol peptidase family protein
7.54983 Ahg471276 partner of Y14-MAGO
9.64365 Ahg470311 Small nuclear ribonucleoprotein family protein
9.74679 Ahg471074 Cysteine proteinases superfamily protein
11.225 Ahg490595 Patched family protein
12 Ahg938953 farnesyltransferase A
12.3288 Ahg351887 small G protein family protein / RhoGAP family protein
13.9642 Ahg479745 Eukaryotic rpb5 RNA polymerase subunit family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression