| Annotation |
|---|
| Description | jgi|Araly1|487657|fgenesh2_kg.6__791__AT5G08230.1 |
| Sequence |
ATGGCTCCTG GGCGTAAAAG AGGAGCGAAC AAAGCCATGG CCATAGGAGC GCTGAGATTG GGTGATCTCG TTCTTGCTAA AGTCAAAGGC TTCCCTGCTT GGCCTGCTAA GATCGGCCAG CCTGAAGATT GGAATCAAGC TCCAGACCCA AAGAAACACT TTGTTCAGTT TTTCGGAACA CAGGAAATAG GTTTTGTTGC GCCACCTGAT ATTCAACCCT TCACTAGCGA GGCAAAGAAT AAACTATTAG CAAGATGTCA AGGTAAAACA GCCAAGTACT TTTCACAAGC CGTGGAGGAA ATCTCTGCTG CATTTGAAGA GTCGCAGAAT CACAAGTCAG ATATAGTAGG TAATGAGGCT CTTTTGAATG CTGTTGAACC TAGTGTGACG AAGCCTAAGA TATTGAATCA AGCTAGTAGT GATGGAAAAT CTGATAAGTT TGACTCTAGG GCGGATCCTT GTCTTGGTAA ATTAGTTGAG AATAATGGTG CAGAGAAAAA GCCTGATATA GGAGATCAGA ATCTATCGAA ATCAAATAAC AGAACCACAT CCCCAAGTAG TGAGCCATTG GAGCATGGAT CACCTGACCC TATTTTAATG GTAGCAGTTG TTGATAAAAT TGACGGTGTC ACTTGCACTG ACCATAGTGA TGGTACTGGA AAGAATTCGG TCAATGATCA GAGGATAATC AGGAAGATAA CAGGTGACTC GAATAAAGAT GAGTTTAGAG CCAAAAGTGT ACCTGATAGT CGAGCTGCTA CAGACAATCA TCTCCTTGGT CCTAATCAGA AATTAAAGGG CAGTAAAAAG GGACAAGATC ATAGTAGTAG AAATAACATT GCCAGTTCTA AAAAGCCAAA AGAATTGCTG AAAGAGAAAC CTGTGAAGAA AAAGAGATTT GAAAGTGAAC TAGGAAAGTC TGCATCAGGA GCAGATGAAA GTAAACGTGC TGCTAAGAGG CCACGTTCTG AAGATGCGAA AGATCAAAAG CAATGTGAGA GCAACCGTCT TCTTCCTGTT GGTGAAGGCA AGGCTGAAGG ATCTGATTCT ACTGGCGTTG TATCAATTCT AAAGCGTGAG ATTGTGTTAG GGATAAGTGC CCTGGGAGGA AAAAATCAAT TTGATAAGGA CATGGTCGCT TATACAAAGC GCAGGAAACA GACAGTGGAG CACACAAGTG TTTCCTCTTT TTCTGGGTCT CTCGTTAAAG AGAGGACAAA TCACCAACAG AAGATGAGTT CATCTTCTGA TAGCGATGTG AAGGTTCAAG CTGCTCAGCT GCCGAAGAGA CGGAGGGCGG TATGTATCTA TGACGATGAT GATGATGATG AAGACCCAAA GACTCCAGTG CATGGAGGAC ATACCGATAT TCCCAAAGCT AATTTAGCTA CTACTGTTGG TCCTAAAAGT ACTAATGCAT CCCATAATAC TTCTATTAAA GCAAAGCTAT TAGCTGGATC TGCAGAAAGT GCGAAAACAG GGAAAGTACC TCTGTATAAA CATAACAAGG ATGCTTCACT TGCACTACCT GATAGGGTGG AAGGGTATAA CTCACCTATG GGAAAACCTG TCAAGGCGTT GCTCCCAAAG AATATCAAGC CGATCTTGAG ATCTCCTAAG AATTCCTATC AGCTGGTTTC ATTTAAGAAA CAGGTGACAG GACAAAATAA AACTGCAAAA GTCTCTGGTG CAGGAATGCC AGATAGCGTG GAGGGCCCTT CAAACAGCCC CTCTATGGGA AAACCAGTCA TCAAGTTACC TCCACAGAAT GTCAAGCAGA TCTTGAGATC TCCTAAGAAG TCCCCTCAGT TGTTTTCAAC TAAGGAGCTG GTGGCAGGAC AGAATAAAAT TGCAAAAGTC TCTGGTGCGG GGATGCCAAA AAAATATCAA GGTGATTCTT CCAAGGACGC AGTGGCTGGT TCTGATAGAG TAAGCTCTTC TCATTCTCAG ACAGCAAATC AGAGAAGCAA ACCAGCTTTT GGGGAAAAGC CAACAGGCAC TCCGAAAGTT GCAACTCGCA GTCGTCTGGA CGATGTTGAA GTGTCAAGGG ACACTTCTGT GAACTTGTCT GCTGACGTGA TTGATGTCAA TCAAGAAAAT GGAAGTGCCC CATTGATCAG TTTTGGGATG CGAGATTCTT CATCATCTAT GAAGGATCTA ATTGCAGCTG CCCAAGCAAA AAGAAAACAA GCACATTCAC ATACTTCACC GTTTGTGAAT CTAGACCATA ATTCCCTTAC CATCGATTCA ATGCAGTCGA GCCAAAGCCC TTTCATGGTT CAAAATGTTT CATCTTCTAC TGGCGATGCC ATGCTGATTG TTGCTCAGGA ACATCAAGAA GATTCGACTC TGTCAAATCA TGGCCGCCAG TCCTCATCAA GTAGCCAAGC TGGGACTGAA GAGAATGAAG AGAGAAGGTT TAGTTCAGGG CATAGGTCAG GTGGTGGTTC ACTGAGTGGT GCCACTGAGG CTGCGATAAC TCGAGATACT TTTGAGGGAA TGATAGAGAC TTTATCCAGA ACTAAGGAAA GTATTAGACG TGCAACACGC CTGGCAATTG ATTGTGCCAA GTATGGGATT GCCAGTGAGG TTGTGGAACT TCTCATTCGA AAGTTGGAAA TTGAGCCTCA TTTTCCCCGA AAAGTGGACC TGTTCTTTCT TCTTGATTCG ATCATCCAGT GTTCCCATAG CCAAAAAGGT AGAGCCGGCT CTTCATATAT TCCTACTGTT CAGGCAGCCC TTCCGCGCCT TCTAGGTGCT GCTGCTCCTC CAGGGACTGG TGCTCGTGAA AATCGTCATC AATGTCGCAA GGTGTTGAGG TTGTGGCTTA AAAGGAAGAT TTTCCCAGAT TCTCTTTTGC GTCGTTATAT TGGTGATCTT GGTGCTTCTG GTGATGATAA AACCGTTGGG TTTTCCCTAC GACGTCCTTC TAGATCTGAG CGTGCTGTAG ATGATCCTCT ACGGGACATG GAAGGGATGC TTGTCGACGA GTATGGGAGC AATGCAAGTT TTCAGCTGCC GGGGTATTTA TCTTCTCACA CTTTTGGAGA TGATGAAGAA GATGAGGATC TTCCAAGCAC ATCACAGGAA GTTAAACACA CACATATGGA AGAGCCAGTC CATGCTTTAG GCAAGTTAGA GGCTCATGGT AGTTCGAGTG ATAAATCTCA CTGTGTAGTG GATGTCAATG GTGGGCTTGA ATTGAAAGAT GCGTCTTGTC AGCTTAAAGA TGATGTCCGT GGGATTGAAG CGAAGGAGGA CTCACCGGCT GCAACCTGTG CAACTGAGCT TCCTTCTTTT TCAGCGGGTT CTCCTCCTCT ACCTCACGAA TCGCCTCCAT CTCCCCCTCC TCTACCTCCT TCTTCCCCCC CACCCCCATC ATCTCCACCG CAGCTGCCAC CAGTGCCACC TCCCTCCGAG CATTGTTTAC CTCCACCAGC AGCTCCATTG GCACCTGCAC AATCTATAGC TCTACCACCA TCATCAATAA CTCGACCGTC CATGCCTAGC CATCCTTCAT TACCACTTCA ACCAGGATTC GCTCCCCCAG CATATCCATT ATTGCAACAT GAATACCAGA TATCTATGCA GCGGGATCAT TCTAGCATTG CCACTAGTAA TCAAATTGTC CAAGTGCCCG TAAACGGTGC ACATGGAAGG CATGCTGATG GGGGTGTAAA ATCTGAATAT TTATTACCGC AGTCATCTTG TTTTGCTCCG GTGCTTTTTA AACATGAAGC GTCTTCACAG AACCAACAGC TTCGGCCAAT CAATACCTCT TTTCTTCAGA GACCTATGAT TAGGAATCTC GCCCCAGCAC CATCCAGCCA TTTTCCGCTT CCATGTCGGA TTGTTCAATC AGAACCCCAG CGGTCCTCCT TTCCACATCC TTACCCTTTT CCTTCCCAGC CAGTTGATGG GCGACGACAT ATGAATGAGG AAGCATGGCG GATGCCTTCA AATGGATGTA ATGCAGATAC TCAATATGGA GCCTGGATAA GTGGAAGAAA CCCATTTCCA GGCTCTCTTA CAGTTACCGA CGGTTTCTTT CAGCCACCTC CAGAAAGACC ACCTTCGGGG ACTATGAGCT ATCAGCTTGC TGCTAATAAC TTCCAAGGTG GCCCTACGAT TTCAGGTAAT ATTGCTTCGC AGATGCTTCC GTCTCGGCCA GACGTACCTT CCGCGGCTCG GTGGAGGCCA TCCTGAAGTT AAGTTCGAAA TAGAGAACCT GCATTCTCTT CCATGAAGGA CATTTTTGGC GGTATATTCA CATCCAGAGG CATCAAAAGT TCAAAACTCT GCAGACTATT GTCAGGATAT TGCTATATAT TGTAATTGTT CCTGACGAAT GTATCACCGG ATCATATTCT TCACAGTATA TGCCCTAGTT TCTAATTTGG TT |
| Length | 4402 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3094266.. 3100377 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G08230.1 |
| Description | Tudor/PWWP/MBT domain-containing protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.2481 |
Ahg927617 | methyl-CPG-binding domain 9 |
| 16.3707 |
Ahg479256 | Protein kinase superfamily protein |
| 21.095 |
Ahg495190 | Protein of unknown function (DUF3414) |
| 22.9129 |
Ahg313173 | Pentatricopeptide repeat (PPR) superfamily protein |
| 29.4618 |
Ahg333928 | global transcription factor group E4 |
| 29.8496 |
Ahg942208 | alfin-like 4 |
| 33.1361 |
Ahg480236 | SH3 domain-containing protein |
| 37.081 |
Ahg487064 | Pentatricopeptide repeat (PPR) superfamily protein |
| 44.9667 |
Ahg478494 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 50.9117 |
Ahg472179 | pentatricopeptide (PPR) repeat-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|