Detail



ID : Ahg487721

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487721|fgenesh2_kg.6__855__AT5G08780.1
Sequence
GCGCCGACTC TGCGTACACT GCAGAGCTTC AATGGCGGCT TCTGCTATAT TAATGTCTAT GGCACACGAA AGAAAAGTTG AGAATCTGAG AGGTTTTATG GTGAATTTGG CGAAATCAAG AGGCTTTTCC CTTCCTGAGA CTAAACGTTT CCAACAGAAA TTCTTGGATC TGTGTTTATC CCGTACTCCT GATCATCCCA CTTATTCCGC TATGATATTT ATTGCTATTA TGGATTTGAA TGAAGAAGGT GGCGCAAGTG AAGATGTTAT ATCTGAGTTT ATAAAGTCCA AGTACAAGAA CTTGCCATTT GCTCACAAGA GTTTGCTCAG TCATCATTTA GCTAAGCTTG TGGAGAAAAG AGAGATACTT TGTGACTGCA ACAGCTACTG TTACTCTCTC CCGGGTGAGA AGAAGACTGT TGCTTCCACT GATGATGAGA GAAAGAGCGC TGTGATAACA GTGAGAAAAA ATGATAAGCG TGTGGCGAAT GAGGTTATGA CTTGCCAAAA CGAGGAAGAA AGTGTTGAAA TTTTGAAGTC TGGGGATCGT AAGGTTGATT TGTTGGAAGA ACAGAGTTTG ACTAAATCCC GAACTGGCTC CAAACGTAAA GCATGTTGTG CCATTAAAGT CATTGAAGTA AGGCACACAG AAGATAATGG AGTCAAAGCA GATTTAAGGG ATTCGACTAT TCAAACTCCT AGGAAAGAGG GAGTTGCTGA AGAACCAGGA GTGGCTGTTG AAAATAGTGA GACTGAAGCT AGGACTGAAG CAAACAGTAG AGGAGGTGAA TTATATGAAG TAGCTGTTCT ATATAAGCAA AATGATGTGT TGACGGATGA GTCGGGTAAA GAAGCAATGG AAACAAGCTC AAAAGAGAGA AAAGCAAAAC TGCGCAGAAC ATCTAACACG ACGAAAGAAG CATGTGTGGA AGTGACGAGT GAAGCATATA AAAAACTTTG GGAGTGCCAA ACCGAAGCAT GCAGCAATAT CATTGCTCTA GAGAAAATGC TAAAACAGTG GAAAGAGAAA GACCAGCAGA ACAAAGCTGT TTCAGAAATT GATGATGTTT CTCGTTTGCC TTTATCAATG GAAAGCTGCA GAGAACTGTG GAAGGCTGCC CAAAAGATAC AAAACCAGCT CTCTGAGATC ATTGATTCCT GTGATGAAAC CGTGGTTCCA TATTCTGAAT CTCCAGGATG TGAAATCGAA GGTCTTAGCA AAGGATTATG CAAAGAGGAT CCCAAAATGA AAACTCCTTG TGGGAATAGT GGATCTGAAA AACCCTCCAA ACAGATTGAA CAGAAGGAAA GACAGAAGTG TTCTCAAAAG AAACCACAGG TCAAGAAAAC GAGAATCAAA AGACTCCGAG ACATAGGAAC AACAGCTGTG AGGAAATCGC CTCGATTCAG CTGATGAAAC TCATAAAAAT ATGCTTCTGA AGAGCATGAT ATTTTATAAA GGTTAGGTTG TTATTTAATA TCAGTATCTA CATAAGTGCA ACATCTTGAA GAATTTGAAT ATAAATTTTT AGTTTTCATA TAAATTTCTC ATGAAAGAAC AAGAATGTGC CTGCTAATGA GGCATTGATG CTAAAACCTA TTAACATTCT 
Length1610
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3514685.. 3516934
Download Sequence
A.thaliana
AGI-codeAT5G08780.1
Descriptionwinged-helix DNA-binding transcription factor family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.9545 Ahg476943 Protein of unknown function (DUF1644)
17.3205 Ahg481513 Protein of unknown function (DUF1645)
24 Ahg487441 Nucleic acid-binding, OB-fold-like protein
27.3679 Ahg939220 arabinogalactan protein 20
38.8844 Ahg471972 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
39.95 Ahg488851
40.2119 Ahg474754 GDSL-like Lipase/Acylhydrolase superfamily protein
51.0294 Ahg942193
51.7107 Ahg918548 GDP-D-mannose 4,6-dehydratase 1
54.2218 Ahg924520 translocase of outer membrane 7 kDa subunit 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression