| Annotation |
|---|
| Description | jgi|Araly1|487441|fgenesh2_kg.6__575__AT5G06310.1 |
| Sequence |
CAAAACCCCA ACGATCAGAG AGACATGGAG GAGACAAAAG ATGATTACAA ATTCCTGAGA ATTCAAGACG CTTTCAAGGC ATTGCATCTT CATGTTAACC TCATTGGAGT CATCGTCGAG CTAGGATTCT CCAATGGCTC TGATTGTTCC CGTACGCTTA AAATCGTTGA TCCATGGCAT TCGGGATCTG GCCTTCCCGT TAAGTTCGTC GCTCGTACCA TTCGAGCGCT TCCTCGTGTT GAATCGGTCG GAGATATCAT CTTTCTTTCA CGTGTAAAGA TTGTGCTGAT TAATCGGAAA ATCACAGCTC TTTGCAATGA AACATCTTCT TCGTCTTTTG CTCTGTTCAA TGGGAAACAT GGCGTGGATT TTATACCTTA CCAAGCATCA CCTAAATTTC TGATGAGAGA ACATGATAAG AACTTCTTAT CAAATCTGAG AGAGTGGATG ATAACTTACA AGTTTGAAGA TGGGTCATGC TGTTTCACAT CCCTGAAAGA TATCAAAGAA GGGGAATGTT CAAACCTATC TTGCCTGATT GTTCACATTT CCAAGGTCTA TAAAGATAGG TGGTACATCT TTGTTTGGGA TGGAACTGAG ATGCCACCAT GCAACATCTT GGTAAAGTCA GAAAGGCTTC CTTTATGTGT CGAACCTGAG ATGTTGCCTA CATACATGTT ACGTAAGTTT CCTACTTTTG GTTCCGTCTT GAGGATCCTA GTAGATAGAG TTAGTGAGAG GCAGGCCATT CACTGTCTTC AACCTGGTCA ACACGTGAAG CTTCTGAACC TTTTCTTTCA AGTAAACATG GGATTATGGA ACGCCACTTT TACTCCCTCT ACAAAGATGC AGTACACAAT GAGCAGAGAG TTGCAAGCTT TTAGTCCTCA AAGAATGTAT GGGGAGAAGT TGTCATCGAG ATGGAACCCC ATTGCACGTT GCATTAGTCC TTCACATTCA GGAATCACAG GGGTTGCCCA TGAGGACGCT CCGTTTGTTT CTCTGATGGA CATTCTGACC TATCACAATG TGACTGCTAA ATTCAGGTGT GTTGTTCGGT TCATACAAGT GTATCCCCGA GATGTCAGAA AACTCCGCGA TTCCCACGGA AATATCAAAC TGCTAGCTAT ACTAGAAGAT GCAACCGCCA GAATCCACGC TTCTCTATAT GCTGCTGAAG GGGAAAAGTT TTTCGGGTGT GAAGACGAAT CTGATGAAGA GGCCCTGGTC AAGAAGCTGA ATAGATTGTT AGGAGGTGAG GAGATGGAGC AAGTGCCAAG AAATCCTCCA TGGGTACAAT GTTGCCTGTT CTCATTCTAC AAACACAAAA TGGATCAATG GGGAAGCAGA AGATTCCGGA TTTTTGATAC ATGGATCAAT GCTTCATGAG ACAAAAAAAA TAATGCTAAT TGAATAGTTA TTGGTAATGA TAAACAAGTG ATTATTTATT TACATAGAAC CACACAATAA AATATTACAT AAGAAAAATA TCTCTCCAAT AATGATAAAA CAAAACAATC T |
| Length | 1521 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2279968.. 2285963 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06310.1 |
| Description | Nucleic acid-binding, OB-fold-like protein |
| TAIR curator summary | Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b. |
| Alias | [AtPOT1b][protection of telomeres 1b] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.87401 |
Ahg481243 | tetraspanin8 |
| 10.8628 |
Ahg940069 | NDR1/HIN1-like 3 |
| 14.6969 |
Ahg938313 | Arabidopsis Inositol phosphorylceramide synthase 1 |
| 15.1987 |
Ahg476385 | PLAT/LH2 domain-containing lipoxygenase family protein |
| 17.4642 |
Ahg327275 | 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 |
| 18.4932 |
Ahg486129 | VQ motif-containing protein |
| 22.3607 |
Ahg477161 | WRKY DNA-binding protein 40 |
| 22.7376 |
Ahg929526 | COBRA-like protein 8 precursor |
| 24 |
Ahg487721 | winged-helix DNA-binding transcription factor family protein |
| 31.749 |
Ahg472978 | salt tolerance zinc finger |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
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| Growth Chamber expression |
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