Detail



ID : Ahg487803

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487803|fgenesh2_kg.6__937__AT5G09810.1
Sequence
AAAAATAAAA GAGTGAGAAA AAATCCTCAG GGCTATATAT TCGCACATAT ACTCGTTTCG CTTTCCTCAG TGTTAGCTGC TGCCGCTGTT GTTTCTCCTC CATTTCTCTC TCTTTCTCTC TCGCTGCTTC TCGAATCTTC TGTATCATCT TCTTCTTCCT CAAGTGAAAA ATGGCCGATG GTGAGGATAT TCAGCCACTT GTCTGTGACA ATGGAACTGG AATGGTGAAG GCTGGTTTTG CTGGTGATGA TGCCCCGAGA GCAGTGTTCC CAAGTATTGT TGGGCGTCCC AGGCACACTG GTGTCATGGT TGGTATGGGT CAGAAAGATG CTTACGTTGG TGATGAAGCT CAGTCCAAGA GAGGTATTCT CACTCTGAAG TATCCAATCG AACATGGTAT CGTTAGCAAC TGGGATGACA TGGAAAAGAT CTGGCATCAC ACTTTCTACA ATGAGCTTCG TGTGGCACCT GAGGAGCACC CGGTTCTTCT CACAGAGGCA CCTCTTAACC CTAAAGCTAA CAGGGAGAAG ATGACTCAGA TCATGTTTGA GACATTTAAT GTTCCTGCCA TGTATGTTGC CATTCAGGCT GTTCTTTCTC TATACGCCAG TGGTCGTACA ACCGGTATTG TGCTCGACTC TGGTGATGGT GTGTCTCACA CTGTGCCAAT CTACGAGGGG TATGCTCTTC CCCATGCTAT CCTTCGTCTT GATCTTGCGG GTCGGGATCT CACAGACTCC CTCATGAAGA TTCTCACTGA GAGAGGTTAC ATGTTCACCA CAACCGCAGA ACGGGAAATT GTCCGTGACA TAAAGGAGAA ACTTGCTTAT GTCGCTCTTG ACTACGAGCA AGAGCTGGAG ACAGCCAAGA GCAGTTCTTC AGTGGAGAAG AACTACGAGC TACCCGATGG ACAAGTCATC ACCATCGGAG CTGAGAGATT CCGTTGCCCT GAAGTTCTGT TCCAGCCATC GCTCATCGGA ATGGAAGCTC CTGGAATCCA TGAAACAACT TACAACTCCA TCATGAAATG TGATGTCGAT ATCAGGAAGG ATCTCTATGG AAACATCGTC CTCAGTGGTG GTTCCACCAT GTTCCCAGGA ATTGCTGACC GTATGAGCAA AGAGATCACT GCGCTTGCAC CTAGCAGCAT GAAGATCAAG GTGGTGGCAC CGCCAGAGAG AAAATACAGT GTCTGGATCG GAGGATCAAT CCTTGCATCC CTCAGCACCT TCCAACAGAT GTGGATTTCA AAGAGCGAGT ACGATGAGTC GGGTCCATCG ATTGTTCACA GGAAATGCTT CTAATCTGGT TCGTGGTGGT GAGTTTGTTA CAAAATCTAT TTTCCCTAGT TGAGATGGGA ACTGAACTAT CTGTTGTTAT GTGGATTTTA TTTTCTTTTT TCTCTTTAGA ACCTTATGGT TGTCTCAAGA AGTCTTGTGT ACTTTAGTTT TATCTCTCTG TTTTCTCTTC TATTTTTCTT TAGGATGCTT GTGATGAGAT GCTGGTTTTT TTTTTGTCCT TAAGCAAAAA AAATATCATA TTATATTTGG TCCTTGGTTC ATTTCTTTGG 
Length1570
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3720447.. 3722835
Download Sequence
A.thaliana
AGI-codeAT5G09810.1
Descriptionactin 7
TAIR curator summaryMember of Actin gene family.Mutants are defective in germination and root growth.
Alias[ACT7][AtACT7][actin 7]
Gene coexpression
MR
MR Locus Description
1 Ahg477124 phosphoglycerate kinase
2 Ahg481719 UDP-D-apiose/UDP-D-xylose synthase 1
2.64575 Ahg941552 RAS-related nuclear protein-1
3.74166 Ahg475728 homolog of anti-oxidant 1
3.87298 Ahg497105 Oxidoreductase, zinc-binding dehydrogenase family protein
4 Ahg472612 ADP-ribosylation factor 1
4.24264 Ahg320991 alpha/beta-Hydrolases superfamily protein
5.2915 Ahg923636 RNA-binding (RRM/RBD/RNP motifs) family protein
6 Ahg471499 glyceraldehyde-3-phosphate dehydrogenase C2
9.16515 Ahg495412 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression