Detail



ID : Ahg471499

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471499|fgenesh2_kg.1__1453__AT1G13440.1
Sequence
TTTCATCATC ACGTTCTTCT TCTCTTTTAA ATAACCCTAA AGCCTCACCA AACCCTCACT CACTAATTTC ACATTCTTCT CTCTCGATAT CATCGAAATC TCTCGATCTC AAATTTCGAA AATGGCTGAC AAGAAGATCA GAATCGGAAT CAACGGTTTC GGAAGAATCG GTCGTTTGGT TGCTAGAGTT GTTCTTCAGA GGGATGATGT TGAGCTCGTC GCTGTCAACG ATCCTTTCAT CACCACCGAG TACATGACAT ACATGTTTAA GTATGACAGT GTTCACGGTC AGTGGAAGCA CCATGAACTT AAGGTCAAGG ATGATAAAAC TCTTCTCTTC GGTGAGAAGC CAGTCACTGT TTTCGGCATC AGGAACCCTG AGGAGATCCC ATGGGGTGAG GCTGGAGCTG ACTTTGTTGT TGAGTCTACT GGTGTCTTCA CTGACAAGGA CAAGGCAGCT GCTCACTTGA AGGGTGGTGC TAAAAAGGTT GTCATCTCTG CGCCAAGCAA AGATGCTCCC ATGTTTGTCG TTGGTGTCAA TGAGCATGAA TACAAGTCTG ATCTTGACAT TGTTTCCAAT GCTAGTTGCA CCACTAACTG CCTTGCTCCT CTTGCCAAGG TTATTAACGA CAGATTTGGG ATTGTTGAGG GACTCATGAC CACTGTCCAC TCTATCACTG CTACTCAGAA GACTGTTGAT GGTCCATCAA TGAAGGACTG GAGAGGTGGA AGAGCTGCTT CCTTCAACAT TATTCCTAGC AGCACTGGTG CCGCCAAGGC TGTTGGCAAA GTGTTGCCAT CCCTCAATGG AAAATTGACT GGAATGTCTT TCCGTGTTCC AACCGTTGAT GTCTCAGTTG TTGATCTCAC CGTTAGACTT GAGAAAGCTG CAACATACGA TGAAATCAAG AAGGCCATCA AGGAGGAATC TGAAGGCAAA CTGAAGGGAA TTTTGGGATA CACCGAGGAT GATGTTGTGT CTACTGACTT TGTCGGTGAC AACAGGTCAA GCATATTCGA TGCTAAGGCA GGGATTGCAT TGAGCGACAA GTTTGTGAAG TTGGTGTCAT GGTACGACAA CGAGTGGGGT TACAGTTCTC GTGTCGTCGA CCTTATCGTT CACATGTCAA AGGCCTAAGT TTACACCAGC AAGAGTTTGT GTGTTGAGTC GTACTGTTCT GAATAAAAAA ATTTCACTGA TTCCATGCGC AGTCATGAGA GTTTGTAGCT TTTTTTTCTT TTTGCTTTCT ATTAATGTTT CCCTGCTTTG AAAGTTGAAA CCATTGGTTT GGTTTTTATG TTAATGAGTT TAGTTCATTG ATTTTCGTGG TAACTCAAAT CCAACTGGCA ACTGCAACAT G 
Length1361
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5378535.. 5381018
Download Sequence
A.thaliana
AGI-codeAT1G13440.1
Descriptionglyceraldehyde-3-phosphate dehydrogenase C2
TAIR curator summary
Alias[GAPC-2][GAPC2][GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C-2][glyceraldehyde-3-phosphate dehydrogenase C2]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg477124 phosphoglycerate kinase
2.82843 Ahg920010 glyoxalase I homolog
5.09902 Ahg491169 rotamase cyclophilin 5
6 Ahg487803 actin 7
6.7082 Ahg495968 NAD(P)-binding Rossmann-fold superfamily protein
7.93725 Ahg938476 triosephosphate isomerase
8 Ahg477673 glyceraldehyde-3-phosphate dehydrogenase C subunit 1
8.77496 Ahg477571 UDP-GLUCOSE PYROPHOSPHORYLASE 1
9.21954 Ahg931489 rotamase CYP 3
20 Ahg489940 nucleoside diphosphate kinase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression