Detail



ID : Ahg487818

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487818|fgenesh2_kg.6__952__AT5G09930.1
Sequence
ATGGGATTAA CGACGAATCT CCATAGCTTA AACCTTCGTT CTGCCTTCTT CTTCACTAAT CCTCTTCCTT GCCATACACT ATTCACCTTC AAACTCTCCT CTGTTTCTAA CCCTAGACGA GAATTCCCCA ATATTATAGC CCAAGTTTCC GCAACCAGCT CCAATTCAGA GCTCGAGTCT CTCTTGTCTA CCGATCGGAA GCTGATCGGT AAGCAATCAA ACAATGGTGC GTCTTCGATT TCGTCTGGAG TGAGACTTGA GAACATTAGT AAGAGCTATG AAGGCGTTAC AGGGCTAAAG GATGTGACTT GGGAAGTGAA GAAAGGAGAA AAAGTAGGTT TAATCGGCGT TAACGGTGCG GGGAAGACGA CACAGCTCAA GATCATAACG GGTCAAGAAG AACCTGATTC AGGAAACGTG ATTTGGGCCA AACCCAATTT GAAAGTTGCT TTCTTGAGTC AAGAATTCGA GGTTTCGATG GGGAAGACAG TGAAGGAAGA GTTCATGAGT GCGTTTAAGG AAGAGATGGA AGTAGCAAGG AAGCTTGAGA GGTTGCAGAA GGCGATTGAA GAAGCTGTTG ATGATTTAGA ACTAATGGGA AAGTTACTAG ACGAATTCGA TTTGTTGCAG AGACGAGCTC AAGAGGTTGA TTTGGATTCT GTCGATGCTA AAATCAGTAA GCTTATGTCG GAATTAGGGC TTGTGTCGGA GGATGCAGAT AGGCTTGTGG CTTCTTTTAG TAGTGGATGG CAAATGAGAA TGTCACTTGG GAAGATTTTG CTTCAGAATC CAGATTTACT GCTATTGGAT GAGCCAACGA ATCATTTGGA TCTTGATACT ATTGAGTGGC TTGAAGGTTA CTTGAATAAG CAAGATGTGC CTATGGTTAT AATATCACAT GACAGAGCGT TTCTTGATCA GTTGTGTACT AAAATTGTGG AAACCGAAAT GGGAGTTTCG AGGACTTTCG AGGGTAATTA CTCTCAGTAT GTAATTTCAA AGGCAGAGTG GGTCGAAGCT CAGTATGCTG CTTGGGAGAA GCAACAGAAA GAGATTGAAG CAACAAAGGA TTTGATTACT AGGCTAAGTG CTGGAGCAAA TTCTGGTCGA GCTTCTTCAG CAGAAAAGAA ACTGGAGAAG CTTCAAGAAG AGGAGCAAAT AGAGAAGCCA TTTCAGCGGA AACAAATGAA AATCAGGTTT CCGGAATGTG GATTAAGCGG AAGATCTGTA GTCACTGTTA AGAATCTTGG ATTTGGTTTT GAGGATAAGA TGTTATTTAA CAAGGCAAAT CTAGCGATAG AAAGAGGAGA GAAAGTCGCT ATAATTGGTC CAAACGGGTG CGGTAAAAGT ACATTGTTGA AACTGATTAT GGGTTTGGAG AAGCCTATGA GAGGTGAAGT GATTCTCGGG GAGCACAATG TCTTGCCTAA CTACTTCGAA CAGAATCAGG CAGAGGCTCT AGATTTGGAT AAAACTGTGA TTGAGACAGT TGTTGAAGCT GCTGTAGATT GGAGAATTGA TGATATAAAA GCTCTTCTTG GTCGCTGCAA CTTCAAAGCT GACATGTTGG ATAGAAAGGT CTCTCTTTTG AGTGGTGGTG AGAAGGCACG CCTTGCTTTC TGCAAATTCA TGGTGAAACC ATCCACTCTA CTTGTGTTGG ACGAACCCAC CAATCACTTA GACATACCTT CAAAAGAAAT GCTTGAGGAA GCGATAAATG AGTACAAAGG CACGGTCATC GCAGTCTCAC ACGATAGATA CTTCATTAAA CAAATTGTTA ACAGAGTAAT TGAAGTCAGA GATGGTGGTT TAATGGACTA TGCAGGAGAC TACAATTATT ACCTAGAGAA GAATGTTGAA GCTAGAGCAA GGGAGCTGGA GAGGGAAGCA GAATTGGAGG AAAAAGCTCC AAAAGTGAAA GCAAAGTCAA AGATGTCAAA GGCTGAGAGA GAAGCACGGA AGAAGCAAAA GATGAAAGCG TTTCAAGCTT CCAAAAACAA GTCTAAGTCC AGCAAAAATG CCAAGAGATG GAATTAA 
Length2037
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3770643.. 3773252
Download Sequence
A.thaliana
AGI-codeAT5G09930.1
DescriptionABC transporter family protein
TAIR curator summarymember of GCN subfamily
Alias[ABCF2][ATP-binding cassette F2]
Gene coexpression
MR
MR Locus Description
5 Ahg474819 galactinol synthase 2
5.19615 Ahg471045 NAD(P)-binding Rossmann-fold superfamily protein
5.2915 Ahg478284 ascorbate peroxidase 2
6.48074 Ahg943195 fibrillin
7.87401 Ahg926343 K+ uptake permease 6
8 Ahg495334 heat shock protein 90.1
9.59166 Ahg496002 Undecaprenyl pyrophosphate synthetase family protein
10.247 Ahg485004 heat shock protein 17.4
11.7047 Ahg475988 alpha/beta-Hydrolases superfamily protein
14.8997 Ahg328542 glutathione peroxidase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression