| Annotation |
|---|
| Description | jgi|Araly1|487887|fgenesh2_kg.6__1021__AT5G10540.1 |
| Sequence |
TCCACTACCG CCGCTTCTCA TTCTCTTCCT CGTCAATCTC CATCAATGGC TTCTCAAGAT TCTCTCTCCT CGAATCCTCT ATTGCAGAAT TTTGACTTCC CTCCGTTTGA CTCTGTTGAT GCTCACCATG TCAGACCTGG GATTCGTGCT CTGTTGCAGC AGCTCGAAGC TGAATTGGAG CAGCTAGAAA AAACTGTAGA GCCTTCATGG CCAAAACTAG TGGAGCCATT AGAGAAGATT ATTGATCGGT TATCTGTTGT TTGGGGAATG ATCAATCATC TTAAGGCTGT CAAGGACACG CCTGAGCTTC GTGCTGCCAT TGAAGAAGTT CAGCCAGAGA AGGTGAAGTA CCAGCTCAGG TTGGGACAGA GCAAACCCAT TTACAATGCA TTTAAAGCTA TTCGAGAATC GCCTGACTGG AAATCACTGA CCGAAGCTCC GCAAATAAAG GAGGCGGTTC TCAGTGGTAT TGCTCTTGAA GACGACAAGA GAGAAGAATT TAACAAAATT GAACAGGAAC TTGAAAAACT TTCTCATAAG TTTTCTGAGA ATGTTTTGGA CGCTACAAAG AAATTTGAAA AGTTGATAAC AGACAAGAAA GAGATCGAGG GGTTGCCGCC ATCTGCACTT GGATTGTTCG CACAAGCAGC TGCTTCCAAG GGACATGAAA ATGCAACTGC TGACACTGGA CCATGGCTCA TTACACTCGA TGCTCCTAGT TATCTTCCCG TCATGCAACA TGCCAAAAAC CGAGCTCTGC GCGAGGAAGT CTACCGTGCT TACTTATCCC GTGCCTCTTC GGGTGATTTA GATAATACAG CAATTATCGA CCAAATCTTG AAGCTTCGAT TGGAAAAGGC TAAGCATCTT GGTTACAGAA ATTATGCTGA GGTAAGCATG GCCACGAAAA TGGCTACTGT AGAGAAAGCA GATGAGCTAC TAGAAAAGCT TCGCAGTGCT TCATGGGATC CGGCTGTTCA AGACATAGAA GACCTTAAGA GTTTTGCAAA GAACCAAGGT GCTGCAGAAG CTGACAGTTT GACTCACTGG GACATCACTT TCTGGAGTGA GAGGCTTCGT GAATCCAAAT ACGATATTAA TGAGGAAGAA CTGCGACCTT ACTTCTCACT GCCAAAGGTT ATGGATGCAT TATTCGGTCT AGCTAAGACA CTATTTGGAA TTGATGTTGT GCCAGCAGAT GGTGTAGCTC CGGTCTGGAA CAGCGATGTT AGGTTCTACT GTGTCAAAGA TTCTTCTGGA AATCCAACTG CTTATTTCTA CTTTGATCCC TACTCTCGTC CTTCAGAAAA GAGAGACGGC GCTTGGATGG ATGAAGTTTT TTCTCGTAGC CGAGTCATGG CCCAGAAGGG TTCCTCCGTT AGGCTCCCTG TTGCTCAAAT GGTCTGCAAC CAAACTCCAC CAGTTGGTGA CAAGCCAAGC CTTATGACAT TCCGTGAGGT AGAGACTGTG TTCCATGAAT TTGGCCATGC TCTTCAGCAT ATGCTTACCA AAGAAGATGA GGGGCTAGTG GCTGGTATCC GAAATATCGA GTGGGATGCA GTTGAATTAC CTTCACAGTT TATGGAGAAC TGGTGCTACC ACAGGGATAC CTTAATGAGC ATTGCTAAGC ATTATCAAAC AGGAGAAACT CTTCCCGAGA ATGTATACAA GAAGCTACTG GCTGCAAGAA CATTCCGTGC AGGGTCCCTT AGTCTTCGCC AGTTGAAGTT TGCTACAGTT GATCTGGAGC TGCACACAAA ATACATGCCA GGTGGGACAG AGACCATCTA CGATGTTGAT CAAAGGGTGT CCATAAAAAC ACAAGTGATC CCTCCACTTC CTGAAGATAG ATTCCTCTGT AGCTTCAGTC ATATATTTGC AGGTGGTTAT GCAGCTGGAT ACTACAGTTA CAAGTGGGCG GAGGTTTTGT CTGCAGATGC GTTTTCAGCT TTTGAAGATG CTGGGTTGGA TGACATCAAG GCTGTTAAAG AAACAGGACA AAGATTCAGA AACACAATAC TCGCTCTGGG AGGAGGAAAA GCACCTCTAA AAGTGTTTGT GGAGTTCAGA GGACGAGAAC CTTCCCCAGA GCCTCTGCTC AGACACAATG GACTCTTGGC TGCTTCTGCT TGAAGTCTTG AACTAATAAT GTCCTTTGCT ACTCTCACAC TCAACTTTGG GATTATTAAT GTCATTCAAT GAAATTAAAC TTTTTTACTT GCTTGTTCAC TGAGCATGCT TCAAGTATTG TAGTAAACAT CTCAGAGATG TGCAACTTGG TAACAAAATA ATGGTTCATG AACGAAACGA ACAAAGATAA TACTTTTTCT TCGAACCATT TTCACATTCT CCACTACATA TTTCTTCATT CCTCTCAATC TTTTCTTTTA CTAAGTCACT CTCAACCCTC TGTTCATGGT GTCACCAATA ATCTAAAAGA ACTAAAGAAC CTTAATCTGA AAGAGGAAAA GGAACTCTTC CACCTCTTGC TCAACCTAGA AATTCTCTAA CTACCCTTTA CATTTTTTCC TCTATCTACT GTTTCCCTAA AACTCAAAAT CTTTTCTTTC GAGTTTCCCT TCCTTTCCCT TTACACCGAA GTTCCACCTC CGCCCAAATT CTCCGATTCT AGTCTCCTGG AGTTGTTATG CATATATCAA CGTACGGTCA ACAGTTATTA CGGGGCTTCT TTTGCTTCCA CAAATGGAGA TTGCACACTA TCCGCATCCG AATCACTTCC TGATGAACTC CCTGACTCCG AATCTGCATA GAGTGCCATA CAAAAATCGA AGGGCACAAG ATCATTTCAG AGGGATAGAA TCTCTT |
| Length | 2826 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4051186.. 4058074 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G10540.1 |
| Description | Zincin-like metalloproteases family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 25.865 |
Ahg494941 | Ribosomal protein L13 family protein |
| 44.2945 |
Ahg942428 | Ribosomal protein S24e family protein |
| 50.3984 |
Ahg492228 | 60S acidic ribosomal protein family |
| 50.5272 |
Ahg485949 | ribosomal protein L23AB |
| 60.0666 |
Ahg477903 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
| 63.9375 |
Ahg950184 | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 |
| 66.0681 |
Ahg489433 | translation initiation factor 3B1 |
| 67.3869 |
Ahg482274 | MOS4-associated complex 3B |
| 75.1931 |
Ahg493599 | Peptidase M50 family protein |
| 80.8332 |
Ahg493389 | Ribosomal L27e protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|