Detail



ID : Ahg487995

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487995|fgenesh2_kg.6__1129__AT5G11580.1
Sequence
ATTTTAGAAA GCAATTGAGC ACGAACCTTA TCCGTTACAG CGGCAATGGA GGACAAATCG TTGACGTTAC CGATTTCTGA GGATTTATCC CGGAAAATAA TCTCTCTTGC CGCCGGTGAA GCTCATACAA TCGCTCTGAC CGGCGATGGA TGTGTTTACT CATGGGGAAG AGGAATGTTT GGCCGTCTTG GTACTGGTAA GGAATCGGAC GAGCTTGTTC CAGTTCGAGT CGAGTTGGAG TTTCCAAATC AAGCGGAAGG AGATCGGGCT CGAATCGTTG GTATTGCTGC TGGTGCTTAT CACAGTCTCG CTGTCTCAGA TGATGGCTCG GTTTGGTGTT GGGGTTATAA CATTTATGGC CAACTTGGTT TTGATGGGGA AAACTCTTTG GCACCATGCT TGATAAAAAA TTTGTTTGAA CAAGGAGCAT CTAGTTCTTC TCTAAATGAT TCAGGTAGAG AAGCTAGATC AGATTTAAAG GTTTGTGCTG TTAAGGCCGG ATCCATGATG TCGCTTGCCA TTGATAATGT CGGAGGTCTT TGGATGTGGG GCAATGTTCC TCCACAAAAC AGTGAACCTG AACCTCGTTT GTCTTTTACA AGCATCCCGA TTCCATTTCC TATACTCGAC TTCCATGGAC GGACGGTTTT GAAGGTAGCA TGTGGGGATG AACACGTTGT TGCCCTCGTT GCACCAGGGG ATATCCACAA AGACAACAGT TATGATGTAT CAGTGCTGTA TTCTTGGGGA AATAATCATC ATGGCCAGTT AGGGCTTGGG GATAAGGAGA GCCGTGCGAG GCCTCAGATT GTGGAGACAT TTAACCAGAA CTCGGGTCTT ACAGTCTACG ACATAGCTTG TGGTGCTCAT CACACAGCTC TTCTCACCTA CAAGAAGGAG ACACAGAAAG GACCAAGCAT TTGCTGGACG TTCGGCTTTG GAGAAAATGG TCAGCTTGGG CATAGAAGTA ACAAAAGCTC ATCGATTCCA GAGCCAGTTT CAGAGCTCCC AGAACACGCT TACTTAGTTT CTGTAGACTG TGGACTATTC CACACAAGCG TGGTGTCCTC TGAGGGATAC GTGTGGTCGT GGGGAATGGA GAGAGGATTA GGATTATGCC CCGATGTCAA CTTCACAGAG GTGGAAGCAG GAGATGATAG TGTACCAAGA AAGATTTCAG CTGGGTCAAG ATTTCGTGAC CCGGTTCAGG TTTCTTGCGG GGCAGCACAT ACAGTTCTTG TGGCAGATGG TGGGTACAAG CTGTGGTCTT GGGGAAGAGG AAGAAATGGA GTGCTCGGGA CTGGGAATGT TAGCGACTGT TATGTCCCTA CTCACGTCTT CTGGCCAAAT GAGCTGAAAC CAGAGAAAGA AGAAGTAGCT GATGCTGACA AAAGCGCATC AACTGAGGAG ATTAAACGGC TAGAATCAAA ACTAATGGTG ATGGAAAGAT ATGCAAGCAT ACTTCATGGA TCCATATTTG GGAAACCTTT CAATGAAGAG GAAGATATCC CGTATTCATT ACGGGTTTCT GGGTATTTCG ATATGGGCAA AGAGTGGGGA GAGATGCTGG AGAGTGCAGA TAAGAGTCAG CTTATGAGGC TTCAAGCTTT CTATGAAGAC ATGATTGTTA GAGTAAAGGA CAAGGTGCTG CAGAGAAGGA TTCAGGAGAT TATGAAAGAT TGTTTTCAAT CTTCAGCACC TAAACACTAA TATCAGTATT ATGTCGTTTT TTTCTTTCGC AGATTAGTTT TGATATCTTG AAAATAACAT CCAAAATATG TGATGTTAC 
Length1789
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4503604.. 4506060
Download Sequence
A.thaliana
AGI-codeAT5G11580.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg480735 tubby like protein 2
5.09902 Ahg496503 MA3 domain-containing protein
11.8743 Ahg907275 Disease resistance protein (TIR-NBS-LRR class) family
18.6548 Ahg470271
19.2094 Ahg328304 RING/U-box superfamily protein
19.6723 Ahg474784 Dormancy/auxin associated family protein
21.166 Ahg473787 sequence-specific DNA binding transcription factors
21.9089 Ahg477585 DegP protease 7
24.5764 Ahg493140 Oxidoreductase family protein
28.2843 Ahg313379 Plasma-membrane choline transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression