Detail



ID : Ahg328304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328304|fgenesh1_pm.C_scaffold_7000531
Sequence
ATGGATGATT ATTTTAGCGC CGAGGAAGGG GATTGCTATT ACTCCTCCGA TCAAGAGTCT TTGGACGGAA TTGATAATGA AGAGTCTGAA TTGCATCCTG TGTCGTCCAA AAAATCAAAC ACTCAGGTCA TCACACAGGA ATCGCTTCTG GCAGCACAGA GAGAAGATTT GCTAAGGGTC ATGGATTTGT TATCGATTAA GGAGCACCAT GCGCGGACTC TTCTTATTCA TTACCAGTGG GATGTGGAGA AGTTGTTTGC TGTGTTTGTT GAGAAAGGAA AAGATAGCTT GTTTTCTGGG GCTGGTGTCA CCGTGTTCGA CTGTCAATAT GGCAACTCTT CCTTTTCTCG CTCTTCGCAG ATGAGTTGTG ATGTTTGCAT AGAGGATGTA CCTGGTGATC AGATGACAAG AATGGACTGT GGCCATTGCT ATTGCAATAA TTGTTGGACG GAGCATTTTA CTGTGCAGAT AAATGAAGGT CAGAGCAAAA GGATTAGATG CATGGCTCAC CAATGCAATG CTATTTGTGA TGAAGATATT GTCAGGAATC TTGTCAGTAA AAAGCGTCCT GATCTAGCTG AGAAGTTTGA TCGTTTCCTT CTTGAGTCTT ACATCGAAGA CAACAAAATG GTCAAGTGGT GTCCAAGCAC TCCCCATTGT GGGAATGCTA TACGAGCTGA GGATGACAAG TTGTGCGAAG TTGAATGTTC CTGTGGTCTT CAGTTCTGTT TCAGTTGTCT GTGTCAAGCC CACTCCCCTT GCTCTTGTTT GATGTGGGAG TTATGGAGAA AGAAGTGTCG AGATGAGTCT GAGACTATTA ATTGGATAAC CGTCCACACA AAGCTGTGTC CCAAATGTTA CAAACCTGTG GAAAAGAATG GTGGATGCAA TCTCGTAAGG TGTATTTGTG GGCAGTGTTT TTGTTGGCTA TGTGGTGGAG CTACTGGAAG TGATCACACT TATAGGAGTA TCGCTGGTCA CAGTTGTGGT CGGTACCAAG ATGACAAAGA GAAGCAGATG GAAAGAGCGA AGAGGGATTT AGACAGGTAT ACGCATTATC ATCACCGATA CAAAGCGCAT ACGGATTCAT CAAAGCTAGA AGATAAACTT AGGGACACTA TCCATGAGAA AGTGTCGAAA TCAGAAAAGA GGGAGTTGAA GCTTAAAGAC TTCAGTTGGG TCACCAATGG ACTCGACCGG TTATTCAGAT CAAGGCGGGT TCTTTCATAT TCGTATGCTT TTGCATATTA CATGTTTGGG GAAGAGCTGT TCAAAGATGA GATGACCCCT GAGGAGAGAG AGATGAAGAA GAATTTGTTT GAGGATCAGC AGCAACAACT TGAAAGTAAT GTGGAGAAAC TTTCCCAGCT CCTTGAGGAG CCCTTTGATG AATTTAGTGA TGATAAAGTT ATGGCAATAA GGATTCAGAT CATCAATTTG TCTGTTGCGG TCGATACCCT CTGCAAGAAA ATGTACGAGT GCATTGAGAA TGACTTACTC GGATCCCTCC AACTTGGCAT CCACAACATC TCACCTTACA GATCAAAGGG AATTGAACAA GCAGCTCAGT TTTATGCGTC CTGGAATTCC AAAGGTGCTG ACAAATTCAT ACCTTTGGAT AGTGGTACAA GCGGAGTGAC ATCGAGGCCT GAGCAAGCTT CAGGATCAAG GAGCTCGGAA GACACCATTT GCTCATCTTC ACAGAAACGT CCCAAAAAAG AAGGAAGCTT CTTAAACAAC AAAGTCACTT TATTGGATTT GAACTTGCCA GCTGATTTTA TCGACCCGAA CTGA 
Length1794
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2639382.. 2641884
Download Sequence
A.thaliana
AGI-codeAT4G34370.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[ARI1][ATARI1][ARIADNE 1][ARABIDOPSIS ARIADNE 1]
Gene coexpression
MR
MR Locus Description
9.64365 Ahg491165 xanthine dehydrogenase 1
11.1803 Ahg481396 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
17.5499 Ahg482837 AMP deaminase, putative / myoadenylate deaminase, putative
18.4932 Ahg480637 Endoribonuclease/protein kinase IRE1-like
19.2094 Ahg487995 Regulator of chromosome condensation (RCC1) family protein
22.6053 Ahg477381 SIN3-like 1
23.9583 Ahg484508 global transcription factor group E8
24.0832 Ahg477582 NAD(P)-binding Rossmann-fold superfamily protein
26.8328 Ahg495713
30.5941 Ahg322516 cleavage and polyadenylation specificity factor 73 kDa subunit-II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression