Detail



ID : Ahg488028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488028|fgenesh2_kg.6__1162__AT5G11880.1
Sequence
AGTGTAACTG TAACAGTCGC ACTCCAACAC ACCTCACAAA AAATCCTCCA GCCATGGCCG CTGCTACTCA ATTTCTCTCC CAACCTTCAT CTATCCGCGG AACCCTAAAT CAATACCAAT TGAACCAAAC CTCCCTCTCA AGAATCCCAA TTCTGTCTCT CAAGTCCACA TTGAAGCCAC TTAAACGCCT CTCCGTCAAA TCCGCCGTAT CCCAAAACTC CCAAAACTCC ACCAAAACCC TCACAAAGGA ATCTGCTTCC TCTTTCGACC ACTGTTTCAA GAAATCATCA GATGGGTTTC TCTATTGCGA AGGAACTAAG GTTCAAGATA TCATGGAGTC AGTCGAGAGA AGACCCTTTT ACTTATATAG CAAACCTCAG ATCACGAGAA ACCTTGAGGC GTATAAAGAG GCTTTGGAAG GAGTGAGATC TGTTATTGGT TACGCTATTA AAGCTAATAA CAATCTCAAG ATTTTGGAGC ATTTGAGGAG TTTGGGCTGT GGTGCTGTGT TGGTTAGTGG AAATGAGCTT AGGCTTGCTC TTCGTGCTGG TTTCGATCCC ACAAAGTGCA TTTTCAATGG AAATGGGAAG TTGTTGGAAG ATTTAGTTCT AGCTGCTCAA GAAGGTGTTT TCGTAAATGT TGATAGCGAG TTTGACTTGA ATAACATTGT GGAAGCTTCA AGAATTTCTG GTAAGCAGGT CAATGTACTG CTGCGTATCA ATCCTGATGT CGATCCTCAG GTGCATCCAT ATGTAGCTAC TGGGAACAAG AACTCGAAGT TTGGTATCAG GAACGAGAAG CTTCAATGGT TTCTCGATGA AGTGAAGGCA CATCCCAAAG AGCTAAAGCT TGTTGGAGCT CATTGCCATC TTGGCTCTAC CATTACAAAG GTGGATATAT TCAGAGATGC TGCGGTTCTC ATGATTGAAT ACATTGATGA AATCCGGCGT CAAGGCTTTG AGGTTAGCTA CTTGAACATT GGTGGTGGTT TAGGGATAGA TTATTATCAT GCTGGCGCTG TCCTTCCTAC ACCCATGGAT CTCATCAACA CCGTAAGAGA GCTTGTTCTT TCGCGAGACC TGAATCTAAT AATCGAGCCA GGGAGATCGC TGATTGCAAA CACATGTTGT TTCATCAACC ATGTAACTGG TGTGAAGACG AATGGAACTA AAAACTTCAT AGTGATTGAT GGAAGTATGG CTGAGCTTAT CCGTCCCAGT CTTTATGATG CCTATCAGCA TATTGAGTTG GTCTCTCCTA CACCGCCTGA AGCAGAGGTT ACCAAATTCG ACGTAGTGGG TCCTGTTTGT GAATCTGCTG ATTTCTTGGG AAAAGACAGA GAGCTTCCTA CTCCTCCGCA GGGAGCTGGT CTGGTGGTTC ATGACGCTGG TGCATACTGT ATGAGTATGG CTTCCACTTA CAATCTCAAG ATGCGACCTC CGGAATACTG GGTTGAAGAA GATGGGTCGA TCACCAAGAT CAGGCATGCT GAGACTTTTG ACGACCATTT GCGTTTCTTT GAAGGTCTAT GAACTCTTTG ATTTACTCAT CATTGTTGCT ATTTTTGTTG AATTGTATGA TTATTCCATA ATGCTATTGC TGTCTT 
Length1606
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4629335.. 4631648
Download Sequence
A.thaliana
AGI-codeAT5G11880.1
DescriptionPyridoxal-dependent decarboxylase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.93725 Ahg918907 nuclear encoded CLP protease 5
20.1742 Ahg479789 Tesmin/TSO1-like CXC domain-containing protein
20.8567 Ahg484358 ribosomal protein L15
21 Ahg491495 TPX2 (targeting protein for Xklp2) protein family
24.2074 Ahg483266 Ribosomal protein S5 family protein
29.4449 Ahg489681 ribosomal protein S1
30.0832 Ahg493880 ribosomal protein large subunit 27
35.6511 Ahg935291 O-acetylserine (thiol) lyase B
39.4968 Ahg487923 L-Aspartase-like family protein
41.328 Ahg479081 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression