| Annotation |
|---|
| Description | jgi|Araly1|918907|scaffold_100188.1 |
| Sequence |
CAAATTGACC AACAAGAATA ATGGCTCATG CTTGCGTCTC TACATCGGCT TCTTCTCTCA GATTCACAGC TGGATTCGTC TCCGCTAGTC CTAATGGTTC CTCTTTCGAT TCTCCCAAGC TTTCTCTTCC TTTCGAGCCT CTTCGTTCAA GGAAGACGAA GAAGTTAGTT AGCGATAGAA AGAATTGGAA GAATTCAACT CCGAAAGCTG TATATTCCGG CAATCTCTGG ACACCGGAGA TTTCTTCTCC TCAAGGAGTT TGGTCCATTA GAGATGATTT ACAAGTCCCT TCTTCGCCGT ATTTTCCTGT GTATGCTCAA GGACAAGGAC CACCTCCTAT GGTGCAAGAA CGTTTCCAGA GTATCATTAG TCAGCTCTTC CAATATAGGA TTATTCGCTG TGGTGGTGCT GTGGATGATG ATATGGCAAA TATAATTGTA GCTCAACTTC TGTATCTTGA TGCTGTTGAT CCTACTAAGG ATATTGTCAT GTATGTTAAT TCTCCTGGTG GATCAGTTAC AGCTGGCATG GCTATATTCG ATACTATGAG GCATATCCGG CCTGATGTGT CCACTGTTTG TGTCGGTCTA GCTGCTAGTA TGGGAGCTTT TCTGCTTAGT GCTGGAACCA AAGGGAAAAG ATACAGTCTA CCGAACTCAA GGATAATGAT CCATCAGCCG CTTGGTGGAG CTCAAGGTGG CCAAACCGAC ATTGACATTC AGGCAAATGA AATGCTGCAT CACAAGGCAA ACCTAAACGG TTACCTCGCG TACCACACTG GTCAAAGCCT GGAGAAGATA AACCAGGACA CAGACCGTGA TTTCTTCATG AGTGCTAAAG AAGCAAAAGA GTATGGACTT ATCGACGGTG TTATCATGAA CCCTCTTAAA GCTCTCCAGC CACTTGCAGC AGCTTAAACG CCTGAAGGTA GTGGTTC |
| Length | 937 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 628473.. 630331 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G02560.1 |
| Description | nuclear encoded CLP protease 5 |
| TAIR curator summary | One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). |
| Alias | [CLPP5][NCLPP1][NCLPP5][nuclear encoded CLP protease 5][NUCLEAR-ENCODED CLPP 1][NUCLEAR CLPP 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.93725 |
Ahg488028 | Pyridoxal-dependent decarboxylase family protein |
| 9.59166 |
Ahg939414 | ribosome recycling factor, chloroplast precursor |
| 13.4907 |
Ahg492531 | NAD(P)-binding Rossmann-fold superfamily protein |
| 14.2829 |
Ahg478562 | GTP-binding family protein |
| 20.8567 |
Ahg931968 | |
| 22.3607 |
Ahg489953 | vacuolar ATP synthase subunit E1 |
| 23.622 |
Ahg482821 | plastid-specific ribosomal protein 4 |
| 23.8747 |
Ahg477055 | vacuolar ATP synthase subunit A |
| 27.9285 |
Ahg473481 | plastid ribosomal protein l11 |
| 28.931 |
Ahg471314 | CLP protease proteolytic subunit 6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|