Detail



ID : Ahg488045

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488045|fgenesh2_kg.6__1179__AT5G12030.1
Sequence
ATGGATTTTG GAAGGTTTCC AATATTCTCA ATCCTCGAAG ACATGCTCGA AGTCCCTGAA GAACAAACCG AGAAGACCCG TAACAACCCT TCAAGAGCTT ACATGCGAGA CGCAAAGGCA ATGGCTGCTA CACCAGCTGA CGTTATCGAG CATCCTGACG CGTATGTTTT CGTCGTGGAC ATGCCTGGAA TCAAAGGAGA TGAGATTCAG GTTCAGATCG AGAGCGAGAA CGTTCTTGTG GTGAGTGGAA AAAGACAGAG AGAGAGCAAA GAGAACGAAG GTGTGAAGTT TGTGAGGATG GAGAGGAGGA TGGGGAAGTT TATGAGGAAG TTTCAGTTAC CTGAGAATGC TGATTTGGAC AAGATCTCTG CTACTTGTCA TGACGGTGTG TTGAAAGTGA TTGTTCAGAA ACTTCCTCCT CCTGAGCCTA AGAAACCAAA GACTATACAA GTTCAAGTTG CTTGAGTTTG TTTGTGATCG TGT 
Length483
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4709710.. 4710192
Download Sequence
A.thaliana
AGI-codeAT5G12030.1
Descriptionheat shock protein 17.6A
TAIR curator summaryEncodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.
Alias[AT-HSP17.6A][HSP17.6][HSP17.6A][heat shock protein 17.6A][HEAT SHOCK PROTEIN 17.6]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg474482 HSP20-like chaperones superfamily protein
3.4641 Ahg337408 HSP20-like chaperones superfamily protein
3.4641 Ahg488044 17.6 kDa class II heat shock protein
3.74166 Ahg894458 Cytochrome bd ubiquinol oxidase, 14kDa subunit
3.87298 Ahg485004 heat shock protein 17.4
4 Ahg481866 HSP20-like chaperones superfamily protein
4 Ahg913155
4.3589 Ahg471804 heat shock protein 70B
5.91608 Ahg494919 FKBP-type peptidyl-prolyl cis-trans isomerase family protein
6 Ahg493744 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression