| Annotation |
|---|
| Description | jgi|Araly1|488150|fgenesh2_kg.6__1284__AT5G13320.1 |
| Sequence |
AATGCAGTTT CACAAATTTC CAAATCCTTT GTAATTGAGT GTATCAATCT GGAGAGAAGA AACGAGACTC TATTGCAGAG AACCAAATAT GAAGCCAATC TCCGATATCA ACGAAAGTTT TGAGAAGCAG CTGAAGTATT TAACTTCAGA TGTGAAGCAA ATACAAGACA ACTTGTTAGA GGAGATAATC ACACCCAACA CCAAAACAGA GTACCTCCAA CGTTTTCTCA TCGATAGGTT CGATAAAGAT CTCTTCAAGA AAAACGTACC GATCGTGACA TATGAAGATA TTAAGCCTTA TCTGGATCGT GTCGTTAATG GAGAGTCATC CGATGTTATA TCGGCTCGAC CTATTACCGG TTTCTTGCTA AGTTCGGGAA CTTCTGGGGG AGCACAAAAG ATGATGCCAT GGAACAACAA GTACTTGGAC AATTTGACTT TCATCTACGA TCTTCGTATG CAAGTTATAA CCAAGCATGT GGAAGGTGTG GAAGAAGGAA AAGGGATGAT GTTTCTCTTT ACTAAACAAG AATCCATGAC TCCTTCTGGC TTGCCTGCTC GAGTCGCAAC CAGCAGCTAT TTGAAGAGTG ACTATTTCAA GCACCGGCCA TCGAACTGGT ACTACTCGTA CACGAGCCCT GATGAAGTCA TCTTATGCCC TAACAACACC CAAAGTCTGT ACTGCCATTT GCTCTGTGGC TTAGTCCAAA GAGAAGAGGT TGTGAGAACG GGTTCCATCT TTGCTTCGGT CATGGTCCGA GCTATCGAGG TTCTTAAGAA TTCTTGGGTG GAGTTGTGTT CAAACATCCG ATCGGGCCAT CTCAGCAACT GGGTCACAGA CTTGGGTTGT CAAAGCTCTG TTTCTTTGGT CCTTGGAGGG CCACGTCCTG AATTAGCAGA CACGATCGAA GAAATATGCA ACCAAAAGTC TTGGAAAGGT ATAGTCAAAA GATTGTGGCC AAACACCAAA TATATCGAAA CTGTTGTTAC CGGTTCAATG GGACAGTACG TTCCCATGTT GAACTACTAT TGTAACGACT TGCCTCTCGT TTCAACAACT TACGGTTCTT CGGAGACTAC CTTTGGGATC AATCTAGATC CTCTGTGCAA ACCTGAAGAT GTTTCTTACA CTTTCATGCC CAACATGTCT TACTTTGAGT TCATACCAAT GGATGGAGAC AATAACGATG TGGTCGACCT TGAAGATGTG AAACTCGGGT GCACTTATGA ACCCGTGGTC ACAAATTTCG CCGGCTTGTA TAGGATGAGA GTGGGAGATA TTGTACTGGT GACTGGTTTC TACAACAACG CGCCTCAGTT TAAGTTTGTA AGAAGAGAAA ACGTCGTCTT AAGCATCGAT TCCGATAAAA CTAACGAAGA AGATCTGTTT AAGGCGGTGA GTCAAGCGAA GCTGGTTCTC GAGTCATTAG GTCTCGATCT GAAAGACTTC ACCAGTTATG CTGACACCTC AACATTTCCC GGTCACTACG TGGTTTACTT GGAAGTAGAT ACCAAAGAGG GAGAGGAGAA GAAGACGTCA CAGTTTGAGC TCGATGAAGA GGCACTCTCC ATGTGTTGTT TGGTAATGGA GGAGTCGCTT GATAATGTTT ACAAGAGATG TCGATTCAAA GACGGATCGA TCGGGCCTCT GGAGATAAGA GTGGTGCGTC AAGGAACGTT TATTTCTCTC ATGGACTTCT TCATCTCACA AGGTGCTTCC ACTGGTCAAT ACAAGACTCC CAGATGCATT AAATCAGGGA AAGCCTTGCA AGTACTGGAG ACATGTGTGG TAGCCAAATT CTTCAGTTCT TGATTGTTCT TCCTTCCCTG GATTACAGGT TCAAGTGATT TGTTTTTTGT TTTTTTGCTA AAAGGGTATG GTTCAAGTTA TTTGTTGTGA TTTCAGTGTG TACTAATTTG TCTGAATGTT TGTTTATATT TT |
| Length | 1942 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5171893.. 5175990 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G13320.1 |
| Description | Auxin-responsive GH3 family protein |
| TAIR curator summary | Encodes an enzyme capable of conjugating amino acids to 4-substituted benzoates. 4-HBA (4-hydroxybenzoic acid) and pABA (4-aminobenzoate) may be targets of the enzyme in Arabidopsis, leading to the production of pABA-Glu, 4HBA-Glu, or other related compounds. This enzyme is involved in disease-resistance signaling. It is required for the accumulation of salicylic acid, activation of defense responses, and resistance to Pseudomonas syringae. Salicylic acid can decrease this enzyme's activity in vitro and may act as a competitive inhibitor. Expression of PBS3/GH3.12 can be detected in cotyledons, true leaves, hypocotyls, and occasionally in some parts of roots from 10-day-old seedlings. No expression has been detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants. |
| Alias | [AtGH3.12][GDG1][GH3.12][PBS3][WIN3][GH3-LIKE DEFENSE GENE 1][GRETCHEN HAGEN 3.12][AVRPPHB SUSCEPTIBLE 3][HOPW1-1-INTERACTING 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg484876 | arogenate dehydratase 4 |
| 9.16515 |
Ahg919597 | fatty acyl-ACP thioesterases B |
| 9.27362 |
Ahg915422 | Disease resistance protein (NBS-LRR class) family |
| 10.0995 |
Ahg480590 | NAC domain containing protein 36 |
| 10.583 |
Ahg491210 | O-Glycosyl hydrolases family 17 protein |
| 11.5758 |
Ahg943574 | Chitinase family protein |
| 13.9642 |
Ahg496228 | Heavy metal transport/detoxification superfamily protein |
| 14.4568 |
Ahg934076 | tubulin beta-9 chain |
| 14.4914 |
Ahg890208 | NPR1-like protein 4 |
| 14.9666 |
Ahg934591 | SCAR homolog 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|