Detail



ID : Ahg919597

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919597|scaffold_100878.1
Sequence
CAGGGAGGCT GCCGAAGAAA GGAGAATTTA GGGTTTGGAG ACTTTGTAGA AATTTGGCGT TACGTTTTTT TGTATTTCTT CAATTATTTC TCATCTGCCC TCTTCATATT GTGTCTTTGA ACGCTTCATC TCCTCGTCAT GGTGGCCACC TCTGCTACTT CGTCATTCTT TCCTGTACCG TCTTCTTCGC TTGATCCTAA TGGAAAAGGC AACAAGATTG GTTCCACGAA TCTTGCTGGA CTCAATTCTG CACCAAACTC TGGTAGGATG AAGGTTAAAC CAAATGCTCA GGCTCCACCT AAGATTAATG GAAAAAAGGT GGGTTTGCCT GGTTCTGTAG ATATCGTAAG GACTGATATC GAGACGTCAC ACCCTGCCCC GAGAACTTTC ATCAACCAGT TACCTGACTG GAGCATGCTT CTTGCTGCTA TAACAACGAT TTTTTTAGCA GCTGAGAAAC AGTGGATGAT GCTTGATTGG AAACCCAGGC GTTCTGACAT GCTGGTGGAT CCGTTTGGTA TAGGGAGAAT TGTTCAGGAT GGCCTTGTGT TCCGTCAGAA TTTCTCCATT AGGTCCTATG AAATAGGTGC TGATCGCTCT GCATCTATAG AAACCGTCAT GAATCATTTG CAGGAAACAG CGCTTAATCA TGTTAAGACT GCTGGATTGC TGGGAGATGG GTTTGGCTCT ACCCCTGAGA TGTTTAAGAA GAACTTGATA TGGGTCGTCA CTCGTATGCA GGTTGTGGTT GATAAATATC CTACTTGGGG AGATGTTGTT GAAGTAGACA CCTGGGTCAG TCAGTCTGGA AAGAATGGTA TGCGTCGTGA TTGGCTAGTT CGGGATTGCA ATACTGGAGA AACGTTAACA CGAGCATCAA GTGTGTGGGT GATGATGAAT AAACTGACAA GGAGATTGTC GAAGATTCCT GAAGAGGTTC GAGGGGAAAT AGAGCCTTAT TTTGTGAATT CTGATCCTGT CCTTGCCGAG GACAGCAGAA AGTTAACAAA ACTTGATGAC AAGACTGCTG ACTATGTTCG ATCTGGTCTC ACTCCGCGAT GGAGTGACCT AGATGTTAAC CAGCATGTTA ATAATGTAAA GTACATTGGG TGGATCCTGG AGAGTGCTCC AGTGGGAATA ATGGAGAGGC AGAAGCTGAA AAGCATGACT CTGGAGTATC GGAGGGAATG TGGAAGAGAC AGTGTGCTTC AGTCCCTCAC CGCAGTTTCA GGTTGCGATA TCGGTAACCT GGCAACAGCG GGGGATGTGG AATGTCAGCA TTTGCTCCGA CTCCAGGATG GAGCGGAAGT GGTGAGAGGA AGAACAGAGT GGAGTAGTAA AACACCAACA ACAACTTGGG GAACTGCACC GTAAAAAAAA ACCCACAACA ATGG 
Length1394
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3044890.. 3047597
Download Sequence
A.thaliana
AGI-codeAT1G08510.1
Descriptionfatty acyl-ACP thioesterases B
TAIR curator summaryEncodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.
Alias[FATB][fatty acyl-ACP thioesterases B]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg488387 Cyclic nucleotide-regulated ion channel family protein
6 Ahg476140
6.32456 Ahg948265 Basic helix-loop-helix (bHLH) DNA-binding family protein
6.48074 Ahg484981 actin depolymerizing factor 1
7.34847 Ahg332000 U-box domain-containing protein kinase family protein
8.3666 Ahg486898 conserved peptide upstream open reading frame 48
9.16515 Ahg488150 Auxin-responsive GH3 family protein
10.247 Ahg489021 Plant L-ascorbate oxidase
13.6382 Ahg480634 Auxin efflux carrier family protein
13.8564 Ahg471294 Pyridoxal-5'-phosphate-dependent enzyme family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression