Detail



ID : Ahg488151

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488151|fgenesh2_kg.6__1285__AT5G13330.1
Sequence
ATCACATCAT AGCCTAAACT AAAGACATAA ACCCTTATTT TGTTGTTCAT CACCAAGCCA AGCTCCATGG CCTAGTCACT CCGCAGAATC CCTGTCATCA ATTCATTCAA ACTTAGTTCC TTTCGAATTC TTGTACATAT ATATATACAC ACTCGTGTTG TTCTCTCGGT GTGTGTGTGT GTTACATATC CGTGTGAATA CAGTTTGTTG TAAAAGTGGA TCGGAGGTAT GGAAAGGGAC CGGTTCCACA GGAAACATCG GCGGCGGCGG ATGAGAATCC ATCTTGGAAC GAGACTGATG TCAACGCCAT GGTCTCCGCT CTCAGCCGTG TCATCGAGAA TCCGACAGAC CCGCCGGTCA AACAAGAGCT TGATAAATCG GATCAACTTC AACAAGACCA AGATCAACCA AGAAGAAGAC ACTATAGAGG CGTAAGGCAG CGACCATGGG GCAAATGGGC GGCTGAAATC CGTGATCCAA AGAAAGCAGC CCGTGTCTGG CTCGGGACTT TCGAGACAGC AGAGGAAGCT GCTTTAGCCT ACGACCGAGC CGCCCTCAAA TTCAAAGGTA CCAAGGCTAA ACTAAACTTC CCTGAACGGG TCCAAGGCCC TACTACCACG ACAACCATTG ATCATGCATC AAGAAGAGTT AGTGAATCAA TGAACTCGCC TCCTATTCGG CCTGGTCCAC CTTCTACTAC TACTACTACT ACTTCGTGGC CAATGACGTA TAACCAGGAC ATACTTCAAT ACGCTCAGTT GCTTACGAGT AACAATGAGG TTGATTTATC GTACTACACG TCGAGTCTCT TCAGTCAGCC TTTCTCTACT CCTTCTTCAT CTTCTTCTTC CTCCCAACAG ACGCAGCAGC AGCAACAACA ACAACAACAG CAACAGCGTG AAGAAGAAGA GAAGAGCTAT GGTTACCATT ATTATAACCA CCCAAGAGAA TAATCTAATT ATTATTGTCG GTCGAATCAG TTTTATAAAT CGCTACCATT TTCGTTTCAT TTTTGGTTTC CGTAACCGTT GTTGCATGGG AAATATGAAT GAACGAGACA CGTGTGTAAC AATTTGTTTT TGTTTCGTAA TTGTTAGTTA AATTTGGATT TGCATGCAGA AGTTTGATTT TCTGA 
Length1135
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5177365.. 5179829
Download Sequence
A.thaliana
AGI-codeAT5G13330.1
Descriptionrelated to AP2 6l
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.
Alias[Rap2.6L][related to AP2 6l]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg946749 Uncharacterised protein family (UPF0497)
9.16515 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
10.198 Ahg905294 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
10.8167 Ahg918583 Auxin efflux carrier family protein
10.8628 Ahg326972 peroxidase CB
12 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
14.4222 Ahg488124 WRKY DNA-binding protein 75
14.4914 Ahg486481 Glycosyl hydrolase superfamily protein
15.8114 Ahg936786 HXXXD-type acyl-transferase family protein
16.3095 Ahg481850 senescence-associated gene 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression