Detail



ID : Ahg326972

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326972|fgenesh1_pm.C_scaffold_6002192
Sequence
ATGAAGTTCT CTGCTTCTTC TTCTTCTACT TCACTCACTT GGACAACCTT AATCACATTG GGATGTCTTA TGCTATATGC CTCTTTGTCC GATGCTCAAC TTACCCCTAC CTTCTACGAC AATTCATGTC CTAATGTTAC TAACATCGTA CGAGATACCA TTGTCAACGA GTTAAGGTCA GACCCTCGTA TCGCCGCGAG CATCCTCCGT CTTCATTTCC ACGACTGCTT TGTAAATGGT TGTGACGCAT CGATCTTGTT AGACAACACG ACATCATTTC GAACAGAGAA AGATGCATTT GGAAACGCAA ATTCGGCTCG GGGATTTCCC GTGATTGATA GAATGAAAGC CGCAATAGAG ACGGCTTGCC CAAGAACCGT TTCATGCGCA GATATGCTTA CCATCGCGGC TCAACAATCT GTTACTTTGG CGGGAGGTCC TTCTTGGAGA GTTCCTTTGG GGAGAAGAGA CAGCTTACAA GCATTTTTGC AACTCGCTAA TGCAAATCTT CCTGGTCCAT CATCCACACT TCCACAACTT AAAGATAGAT TTAGAAATGT TGGCCTCAAC CGTCCTTCTG ATCTCGTTGC TCTTTCCGGT GGCCACACAT TTGGTAAAAA CCAATGCCGG TTTATTATGA ACAGACTATA CAACTTCAGC AACACCGGTT TACCCGACCC TTCTCTCAAC ACTACTTACC TACAAACTCT TCGCGGGTTG TGTCCCCGTA ATGGTAATCT AAGTGCCTTG GTGGATTTTG ATCTGCGTAC GCCTACGGTT TTCGACAACA AATACTATGT GAACCTTGGT GAGCGAAAAG GTCTTATCCA GAGCGACCAA GAATTGTTCT CTAGCCCCAA TGCCACGGAC ACAATCCCTT TGGTGAGATC ATATGCTAAT AGCACACAAA CCTTCTTCAA TGCGTTTGTG GAGGCAATGA ATAGGATGGG AAATATCACA CCTCTCACAG GAACTCAAGG ACAAATCAGG TTGAATTGTA GGGTGGTGAA TTCCAACTCT CTACTCCATG ATGTTGTTGA AATTGTTGAC TTTGTTAGCT CTATGTGA 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12290107.. 12292295
Download Sequence
A.thaliana
AGI-codeAT3G49120.1
Descriptionperoxidase CB
TAIR curator summaryClass III peroxidase Perx34. Expressed in roots, leaves and stems. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response.
Alias[ATPCB][ATPERX34][PERX34][PRX34][PRXCB][ARABIDOPSIS THALIANA PEROXIDASE CB][PEROXIDASE 34][peroxidase CB]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg905294 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
8 Ahg474413 NAC domain containing protein 19
9.79796 Ahg485262 peroxidase CA
10.6771 Ahg485264 peroxidase CB
10.8628 Ahg488151 related to AP2 6l
11.4891 Ahg939361
13.0384 Ahg939957 Peroxidase superfamily protein
18.9737 Ahg476851 extensin 4
20.1246 Ahg472780 FAD-binding Berberine family protein
20.4939 Ahg487361 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression