Detail


ID : Ahg488205

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488205|fgenesh2_kg.6__1339__AT5G13820.1
Sequence
TCTTCTTCGT TATTTCTATT CTAGAAGAGA GAGAGAGAAA GACAAGGACG ATCGCTAAAT CTTTTTTCTC TAAAATCTTA GAATTTCCAA GTCTCTGTAA AGTTTTCATT GTATAGCACA ATTGTTCTAA TCAGAGATTC GTGAGAGGTA AAGGTTGCGT AATTATTCAG TTTGCGTGAT CTATATATAA TTAACTGGCG CGATATTGTG ATCCAGGACT CGTTGTTGGC TAATTAGGTA GTTCTGTTAT GCATAATTGA GAGATGGTGG TCAAAAGGAA GTTAAGTTGT GGCTCTAAAG GTTTTGATTT CCCCAATATT CCCAAGGCTC CTCGTTCAAG CAGGAGGAAG GTGTCAGGTA AGAGAGCTGA TGATGATTAT GAAAGTGAGA TCTGTGCAAT TGATTTGCTT GCTTCTCTTG CTGGCAAGTT GCTGGAAGAA AGTGAAAGTT CCTCAACGTC TACCTATGCA TTTGAAGGTG ATAATCTTGA TCATTTGGGT GGAGTGGTTA AGCTTAAGCA AGAACTTGAA GATGGCTATA ACAAGCCTTG TCTATCTAAG TTTTTCGATC AAGGAAACCC AGCTTCAAAG TCTACTAGTG AAAATACTAG TGTGACTTGT TTGCCATTTT CGTCTTTGGA AAATGATTGC ATTTTGGAGC AAACACCGGT TTCTGATTGT AAGACGGCGT GTGGTTTGAA GTCCCTGGTA GGGGAGGAGA CATGTGTTGT TAATGAGGAT GCCGGGTCTG AACAAGGAGA AGCAACTGGT GCCTTAAAGG ATCCAAGTCA ATTACATTTG CAGTCTCCAG AATCGGTCCA TCTGGATGGA GATGTAAAAT TGCCACCATG CACGGATCAA CTCCCTAATG ATTCTTTTGA AGGATATGGG AATCATTCTA AGTTAGTTTG CAGAGATGAT GACGAAAACT ATTGTAAGTA TTATAAATTT AGTGACAAAT GTAAGTCATA TAGGCCTCCC TTCCGGGTTA GAAATAGAAG AATAATGCAG TCAGTGAAGA CAAAATACGG CGGGAGATCA ATCTCCAATT TGAAGTGTTT TGAAGACACT AGAACAGATG GTCGTTTGAA GGCTCTGTAC CGCAAGAGAA AATTATGTTA TGGTTACAAC CCATGGAAGC GTGAGACCGT TCATAAGAAG AGAAGATTGT CTGCCAAAGG GTTGGTCGTT AATTATGATG GAGGGCTCAG TAGTGAAAGT GTTTCCAATT CACCTGAAAA GGGAGAATCA GAAAATGGTG ATTTCTCTGC TGCAAAAATA GGTCTTCTTT CGAAGGACTC CCGTGTAAAG TTCAGCATCA AGTCCCTTAG GATTCCGGAG CTTGTTGTTG AAGTTCCAGA AACAGCAACA GTAGGCTTAT TGAAGAGGAC AGTGAAGGAG GCTGTTACTG CTTTACTCGG TGGTGGAATA CGTATTGGGG TGTTAGTCCA AGGGAAGAAG GTTAGAGATG ACAACAACAC ACTATCACAG ACTGGTCTTT CGTGTAGAGA AAATCTTGGC AACCTTGGCT TCACATTGGA GCCTGGTCTG GAAACACTGC CTGTACCTCT TTGTTCTGAA ACTCCTGTCG TTTCTGTGCC AACTGATTCT ACAAAGTTGT CAGAAAGGTC CGCAGCTTCT CCCTCGTTAG ATACTAGAAT TCCTATCCTT CTCCAAGATG AAGATCCCCT GATTAATTTG GGAAATAGTG TGGAGAACAA TCATGAATTA GTCCCACATC CGAGTGACAT ATCAGCAGCT GATGAACAAC CTTCATCAGA TTCAAGAGCG CTGGTTCCAG TTTCGGCCTT GGAATCCGAG GCTCTTGCAC TTGTTCCAGT TAACGAGAAA CCTAAGCGTA CAGAGCTTTC ACAGCGCAGA ACCAGGAGAC CATTCTCTGT TACAGAGGTA GAAGCTCTAG TACGAGCAGT TGAAGAAGTT GGGACTGGAA GATGGCGTGA TGTGAAGTTG CGTTCTTTTG AAAATGCAAG TCATCGAACC TATGTGGACT TGAAGGACAA ATGGAAAACG CTGGTTCACA CAGCAAGTAT ATCACCACAG CAACGAAGAG GAGAACCAGT GCCTCAAGAT CTGCTAGACA GAGTCTTAGG AGCACATAGG TTTTGGTCAC AGCACCAAAT GAAACAGAAC GGGAAACATC AGGTGGCTAC AAGTACAACA ATGGTGGTTG AATCAGGTTC GTCCGTGTAA AGAAGGAGAA TGTTAATAAC AATAACTTTC ACTTGACGAC TAAGGAACCA AAGTGGGCAA CTGTACAAAG GCAAACAACA AAAGTACAGA ACCATACTTA ATTTCTGGAA AGAAGACATT TTTTTTTGTA ATCATAGCTG GTAGAAACTT GACGTTCCTT GGCACTTTTG GTTACTTTTA TGGTACGTCT GTTCATTCCA AATTTCTAGT TGATTTGATT ATGTAAT
Length2437
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5375145.. 5378789
Download Sequence
A.thaliana
AGI-codeAT5G13820.1
Descriptiontelomeric DNA binding protein 1
TAIR curator summaryEncodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.
Alias[ATBP-1][ATBP1][ATTBP1][HPPBF-1][TBP1][H-PROTEIN PROMOTE][telomeric DNA binding protein 1]
Gene coexpression
MR
MR Locus Description
12.1655 Ahg476076 NAC-like, activated by AP3/PI
18.735 Ahg477665 NAC domain containing protein 46
24.0832 Ahg922121 Major facilitator superfamily protein
24.0832 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
32.4037 Ahg929642 Dihydroxyacetone kinase
38.9615 Ahg936786 HXXXD-type acyl-transferase family protein
39.1408 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
45.0555 Ahg949254 glutamate receptor 1.3
47.0744 Ahg478996 NAC domain containing protein 3
53.2916 Ahg318977 O-acetylserine (thiol) lyase (OAS-TL) isoform A2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression