Detail



ID : Ahg488382

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488382|fgenesh2_kg.6__1516__AT5G15330.1
Sequence
CTCTCGCGTT CGTTCTTATC CAGGCCAGCT CTGCTTCACC GTCGCAATCT CCGTCTTCTC CATTAGATCC AACACAGAGG CTCTTCTACA TGAAATTCGG CAAAGAGTTT CGTACTCACC TCGAAGAAAC TTTACCTGAG TGGAGAGACA AGTTCCTTTG CTATAAACCT TTGAAAAAGC TTCTCAAATA TTATCCTTAC TCTTCCGATC ACCTCGATTT GCGTCCCGTA TTCGCTGACA CCACTAACAT CTCCTCCGCC GCAGACGACG GCGATGTGGC TCCCGGCGTT AGGCCTACGG AAGATCTCCA GGGTTCGTTT GTGAGGATAC TTAACGAGGA ACTTGACAAG TTTAATGACT TTTACGTTGA TAAAGAAGAA GATTTCGTTA TCAGATTACA GGAGCTTAAG GAACGAATCG AGCAAGTTAA AGAGAAGAAC GGAAAGAATG GGGACTTCGC ATCAGAAAGC GAGTTCAGCG AAGAAATGAT GGATATTCGC AGAGACCTTG TTACCATTCA TGGCGAGATG GTGCTCCTGA AAAACTACAG CTCCCTTAAT TTTGCAGGAC TTGTCAAGAT TTTGAAGAAG TACGATAAAA GAACAGGTGG ACTTCTACGT CTGCCTTTCA CACAGCTTGT TCTCCATCAA CCTTTCTTTA CAACAGAGCC CCTTACTAAG TTAGTCCGTG ATTGTGAGGC CAATCTTGAG CTTCTCTTTC CTACAGAAGC AGAAGTTGTA GAGTCTTCCA GCACAGTGCA CCCACACTCA AGCTCACATC ATCACAACTC CCCAAGAATC TCAGCCGAGA CTTCCTCAAC TCTCGGCAAT GAAAATCTTG ATATATATAA GAGTACACTC GCTGCAATGA GAGCTATAAG AGGGTTACAA AAGGCTAGCT CGACATACAA CCCATTATCA TTCTCATCGC TTCTTCAGAA CGAGGATGAT GAGACAGTAA CAGCTGAAAA CTCTCCAAAC TCTGAGAACA AAGATGATTC AGAGAAGGAA GATACTGGAC CTTCCCACTG ATCAGAAGAG AATGAATGAT GCTCCTTTTG ATCAAGATTT TGAGATTTTG CTTCTTGATA TCACCCTAAC TTTTCATATA TTAACACATT TTACTCCTTC ACCTTTTGCA GAGCACAGCT TCTGTATGCA TTTGAATTGT AGTATAGTCG TTCATAGATT TTCAATGAAA ATTTTCTCCA TGGTCTC 
Length1217
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6001745.. 6003468
Download Sequence
A.thaliana
AGI-codeAT5G15330.1
DescriptionSPX domain gene 4
TAIR curator summary
Alias[ATSPX4][SPX4][ARABIDOPSIS THALIANA SPX DOMAIN GENE 4][SPX domain gene 4]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg341139 demeter-like 2
4.24264 Ahg481149 P-loop containing nucleoside triphosphate hydrolases superfamily protein
5.09902 Ahg486174
12.4097 Ahg482130 DNA topoisomerase, type IA, core
13.5647 Ahg356151 DNA/RNA polymerases superfamily protein
13.8564 Ahg478555 Protein of unknown function DUF106, transmembrane
17.7482 Ahg945746 Potassium transporter family protein
24.3105 Ahg345419 zinc finger (C2H2 type) family protein
25.2587 Ahg496605
26.9815 Ahg479767 prefoldin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression