Detail



ID : Ahg945746

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945746|scaffold_701975.1
Sequence
TTACTCGCCG GCGGCTTAAA TCATGGCTGA TAGGAGAAAC AGGTGTAACC AGATCCTCCT TTTAGCATAT CAGAGTTTTG GCTTAGTGTT TGGAGATTTG AGTATTTCTC CTCTCTACGT GTATAAATGT ACTTTCTACG GAGGATTGAA ACATCACCAA ACAGAAGATA CCATATTTGG CGCCTTTTCT TTGATATTTT GGACCATCAC TCTCCTTTCA CTCATCAAGT ACATGGTTTT TGTATTAAGT GCAGATGACA ATGGTGAAGG AGGGATCTTT GCTTTGTATG CTTTGCTCTG CAGACACGCT AGATTTTCTT TGCTTCCCAA TCAGCAAGCT GCTGATGAAG AAATCTCCAC ATACTATGGC CCTGGAGATG CAAGTAGAAA TTTGCCTGGT TCTGCTTTCA AAAGCCTTAT AGAACGAAAT AAAAGATCAA AAACTGCTTT GCTTGTTTTA GTCTTGGTAG GAACTTCCAT GGTAATAACC ATCGGTGTCC TTACACCAGC AATTTCAGTC TCTTCGTCTA TTGATGGCCT TGTGGCCAAG ACAAGTCTGA AGCATAGTAC TGTGGTCATG ATAGCATGCG CTTTACTGGT TGGACTTTTC GTTCTGCAGC ACCGTGGCAC CAATAAAGTT GCCTTTCTCT TTGCACCTAT AATGATTTTG TGGTTGTTGA TAATTGCAAC TGTTGGTGTG TACAATATTG TGACTTGGAA CCCCAGTGTA TACAAAGCCT TATCTCCCTA CTACATCTAT GTATTCTTTA GAGACACTGG AATAGATGGA TGGCTATCCC TTGGAGGCAT TCTTTTATGC ATTACAGGAA CGGAGGCTAT CTTTGCTGAA CTTGGCCAAT TTACAGCCAC ATCTATAAGG TTTGCGTTTT GTTGTGTTGT TTACCCGTGT CTGGTGCTTC AATACATGGG CCAAGCTGCG TTTTTATCAA AGAATTTTTC TGCTCTACCT TCAAGCTTTT ATTCTTCCAT TCCAGACCCA TTTTTCTGGC CGGTTCTCAT GATGGCTATG CTGGCTGCAA TGGTCGCAAG CCAAGCAGTC ATATTTGCCA CGTTCTCAAT TGTCAAACAA TGCTATGCAT TGGGATGCTT CCCGCGCGTG AAGATTGTTC ACAAACCAAG ATGGGTCCTT GGCCAAATTT ACATCCCTGA GATCAATTGG GTTGTCATGA TCCTCACCCT CACTGTCACC ATTTGTTTCC AAGACACTCG ACACATAGCT TTTGCTTTTG GGCTCGCCTG CATGACTCTA GCCTTTGTGA CAACTTGGTT GATGCCTCTC ATTATCAACT TTGTCTGGAA CCGTAATATC GTCTTCTCCG TCCTCTTCAT CCTCTTCTTC GGGACCATAG AACTTGTCTT CGTTGCATCA GCCTTAGTCA AAATTCCTAA AGGAGGCTGG ATCACTCTCC TCCTTTCCCT CTTCTTCACC TTCATCACAT ATGTATGGCA TTACGGCAGC AGAAAGAAAT ACCTGTGCGA CCAGCACAAC AAGGTCCCTA TGAAATCAAT CCTAAGCCTT GGCCCGAGCC TTGGGATCAT CAAAGTCCCT GGGATGGGTC TTATCTACAC CGAGCTCGCC AGCGGTGTTC CCGCCACATT TACTCACTTT CTAACAAACT TACCGGCGTT CTACCAAGTT GTCGTCTTTG TCTGCTGCAA AACTGTCCCT ATCCCGTATG TGCCGCAGAA AGAACGGTAC CTTATCGGCC GGATTGGACC GAAAACATAC AGGATGTACC GATGCATTAT CCGAGCCGGT TACAAAGACG TGAACAAAGA CGGAGATGAC TTTGAAGACG AGCTGGTGAT GAGCATTGCC GAGTTTATCC AGCTAGAATC TGAAGGCTAC GGTGGCTCAA ACACTGACCG TTCGATTGAT GGTCGGCTCG CTGTTGTGAA AGCCTCAAAC AAGTTTGGGA CAAGGCTGTC TCGGTCTATA TCCGAGGCCA ACATTGCAGG CAGCTCAAGA TCACAGACAA CAGTAACAAA CAGCAAATCT CCGGCTCTAC TTAGACTGAG AGCAGAGTAT GAGCAAGAGC TTCCGAGACT GAGCATGAGA AGGATGTTTC AGTTCAGACC AATGGACACT AAATTCAGGC AACCACAGGT GAAGGAGGAG CTCTTTGATC TGGTGAACGC TAAGGACGCA GAAGTGGCAT ACATTGTTGG ACACGGTCAC GTGAAGGCGA AGCGCAACTC GGTATTTGTG AAACGTTTGG TCATAAACGT GGCTTACTCG TTCTTGAGGA AGAATTGCAG AAGCCCAGGC GTGATGTTAA ATATTCCTCA CATTTGTTTG ATCAAAGTGG GCATGAACTA TTACTTGTAA CTGAGAGTTT TTATAACTGA T 
Length2371
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7422067.. 7425831
Download Sequence
A.thaliana
AGI-codeAT4G23640.1
DescriptionPotassium transporter family protein
TAIR curator summaryFunctions as a potassium transporter and is required for the establishment of root tip growth.
Alias[ATKT3][KUP4][TRH1][TINY ROOT HAIR 1]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg945436 Uncharacterised conserved protein UCP022280
6.48074 Ahg903108
6.55744 Ahg475305 Adaptor protein complex AP-1, gamma subunit
8.83176 Ahg473976 root hair initiation protein root hairless 1 (RHL1)
10 Ahg326991 ARM repeat superfamily protein
10.7238 Ahg909874 pyrophosphorylase 1
11.225 Ahg356151 DNA/RNA polymerases superfamily protein
17.7482 Ahg488382 SPX domain gene 4
18.3303 Ahg493925 20S proteasome beta subunit PBB2
19.2094 Ahg927697 Proteasome component (PCI) domain protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression