Detail



ID : Ahg488413

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488413|fgenesh2_kg.6__1547__AT5G15710.1
Sequence
AAAGGAAGAA GCTTGTTGCA TAATATCTTG AGGTAAATTA CTAGTTACTG ATCCAAAGTT AGAATCTTTG CTCTAACTCC AGGCTAGCTG ATTGCGTAGC TTCCGATTGA TTTCTACCTG AGTTTTGAGT TCCTTTGTGG TCACTTTGTT GTTCTTCTGC TGGGTTTTTT GTTCGAGGAT CTGATACTTC TGTGTGGTCG ATGATCGAGT TATCTTCCTT GGGTTTTGGG GATCTAAGTC ATCTTGAGGT TATATAGCTA ATGGTTTGGA TTTGAGTTTG AATGGAGCGT TTGGGATTTT GGGGATTGCT AATGGGTAGT GTGGAAAAGT CATTGGATTC TGGAAATTCG GTGGCTTGCT CTGCATCTGC TAAGAATGGA GACGAAGATA GTAGTAGTAG TACTTCATCG AAGCAAGTTT CACCATTGAA GGGTTCTGGG TCGAGAAATA CTAGTCCTTT AGGTCGAGTT GGGTCGAGAA ACACGAGTCC TTCTAGGCAG AAAGTGGTCA AGACGAAGCC TCGTGGTTTA GAGGAAGAAA CAGTTGCTTC ATTTGGTAAA CCAGTTGTTG CTGATGTGCA GATGGAGGAT GGTATATGGG CAATGCTTCC AGAGGATTTG CTCAACGAGA TTTTAGCTAG GGTTCCACCG TTTATGATAT TTCGAATCCG GTCTGTTTGT AAAAAATGGA ACTTGATTCT TCAGGATAAT AGTTTTCTCA AGTTTCACTC AAATGTGTCA TCTCATGGGC CTTGTCTTCT CACTTTTTGG AAGAACTCAC CGCAGATTCC GCAATGCTCG GTTTTTAGTT TGCCATTGAA GACATGGTAC AAAATTCCAT TCACGTTTTT GCCTCCATGG GCTTTTTGGT TGGTTGGTTC TTCAGGTGGT CTCGTTTGCT TTTCAGGTAT GGATGGTCTA ACTTTCAGAA CTTTAGTATG CAATCCTCTG ATGCAGAGTT GGAGGACTCT ACCTAGTATG CACTATAACC AACAAAGGCA ATTGATTATG GTCGTAGATC GCTCAGAAAA ATCGTTCAAA GTTATAGCCA CAAGTGATAT TTATGGTGAT AAGTCAGTTC CTACCGAAGT GTATGATTCC AAAACTGATA AATGGTCCTT ACATCAGATA ATGCCTGCGG TGAACTTATG CTCTTCGAAA ATGGCTTATT GTGATTCCCG GTTATATCTA GAGACTCTCT CGCCTCTTGG GTTGATGATG TATCGGCTTG ATACAGGGCA ATGGGAACAC ATTCCAGCTA AATTCCCGAG ATCTTTATTG GATGGTTACT TAGTTGCTGG AACTCAGAAG AGATTGTTTC TCGTAGGAAG GATTGGCCTC TATAGTACCC TCCAAAGCAT GAGGATATGG GAGCTTGATC ACACAAAGGT TTCTTGGGTA GAGATAAGTA GAATGCCACC AAAGTACTTC CGAGCACTTC TGAGACTTTC GGCGGAGAGG TTTGAGTGTT TTGGCCAAGA TAATTTGATC TGCTTTACGT CTTGGAATCA AGGAAAAGGT CTTCTATACA ATGTGGATAA GAAGATTTGG TCTTGGATTT CCGGTTGTGC TCTTCAGTCA TGCAACAGCC AAGTGTGCTT TTATGAGCCA AGATTTGATG CATCTGTCCA CTGAACAATA AGTAATCGTC TGTCTCACAA CATTCTTGAA AACTTACAAG TTCGCTAGCA AAACATGTCA GAGATATGAA ATCGAAAAGC CTTTGGTGTG TACCTTCAGT GTTAATGAAG ACCTCGTCAG CAATGATATG CTTCACCAAT GATTAACAAT ATCGGGGAGA AAAACTGTAA GATAAACTTG TTTCTAGCTT TCGGTAAATT AGCATTCACT GGATATGAAA ACTTTCTC 
Length1868
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6136506.. 6138269
Download Sequence
A.thaliana
AGI-codeAT5G15710.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.412 Ahg480175 TLD-domain containing nucleolar protein
22.2261 Ahg492932 GDA1/CD39 nucleoside phosphatase family protein
24.98 Ahg940448 nuclear matrix protein-related
28.8791 Ahg889850 cysteine-rich RLK (RECEPTOR-like protein kinase) 7
31.0161 Ahg347608 SIT4 phosphatase-associated family protein
32.5576 Ahg481668 Uncharacterised protein family (UPF0497)
49.1121 Ahg336766 Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein
52.1344 Ahg952033 Cyclase family protein
53.0283 Ahg897508 type one serine/threonine protein phosphatase 5
55.2811 Ahg475328 aminophospholipid ATPase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression