Detail



ID : Ahg488599

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488599|fgenesh2_kg.6__1733__AT5G17330.1
Sequence
TTGATTATTG ATATAAAACA CCTATAAGGT GTCTCTCTTC TTCCTCCATT ATTCCCATTC ATCACTTTCC TCGATCTCAC TTTCCCTCTC TCATCATCAT CTCTTGGTAT TCTCTCTCAT CGCCGTGATG GTGCTCTCCC ACGCCGCATC GGAGTCGGAT GTCTCCGTCC ACTCCACATT CGCATCACGT TACGTCCGTA CTTCACTTCC TAGGTTCAAG ATGCCTGAAA ACTCGATACC GAAAGAAGCG GCGTATCAGA TTATCAACGA CGAGCTGATG CTTGACGGGA ATCCACGCTT AAACTTGGCC TCTTTCGTGA CGACGTGGAT GGAGCCTGAG TGTGATAAAC TCATCATGTC CTCCATTAAC AAGAACTATG TTGACATGGA CGAGTACCCC GTCACCACCG AACTCCAGAA TCGATGTGTG AACATGATTG CACATCTATT CAATGCACCG TTAGGAGAGA CGGAGACAGC CGTCGGAGTG GGAACCGTTG GATCATCGGA GGCCATAATG TTGGCCGGTT TGGCCTTCAA GCGTAAATGG CAGAACAAGC GCAAAGCCGA AGGCAAACCC GTCGATAAAC CCAACATTGT CACCGGAGCC AATGTTCAAG TGTGTTGGGA GAAATTCGCT AGGTACTTTG AGGTTGAACT TAAGGAAGTG AAATTGAGTG AAGGATACTA TGTGATGGAC CCGCAAAAAG CTGTTGATAT GGTTGATGAG AACACTATTT GTGTTGCGGC CATTCTTGGT TCCACTCTTA ATGGAGAATT TGAAGATGTC AAACTCTTGA ACGATCTCTT GGTTGAAAAG AACAAAGAAA CCGGATGGGA TACACCAATC CACGTGGATG CCGCAAGTGG AGGATTCATT GCACCGTTTT TGTATCCGGA ACTGGAATGG GACTTTAGAC TGCCATTGGT GAAGAGTATC AATGTGAGTG GTCACAAGTA TGGACTTGTG TACGCAGGAA TTGGTTGGGT GATTTGGAGA AACAAAGAGG ATTTGCCTGA GGAACTCATC TTCCATATCA ATTATCTTGG TGCTGACCAA CCCACGTTTA CTCTCAATTT CTCCAAAGGT TCAAGTCAAG TCATTGCTCA ATACTACCAA CTTATCCGAT TGGGCCACGA GGGTTATACA AATGTGATGG AGAATTGCAG AGAGAATATG ATCGTGCTAA GGAAAGGACT TGAGAAGACA GAAAGGTTCA ACATCGTATC AAAGGACGAG GGAGTGCCAC TTGTCGCTTT CTCCTTGAAA GATAACAGCT CTCACACTGA GTTCGAAATC TCCGACATGC TTCGCAGGTA TGGATGGATA GTGCCGGCCT ATACAATGCC TCCAGATGCA CAACACATCA CTGTTCTTCG AGTAGTTATC AGAGAAGATT TCTCGAGAAC ACTTGCAGAG AGACTTGTGA TCGATATAGA GAAAGTGATG CGTGAGCTCG ATGAGCTTCC TTCTAGAGTG ATTCACAAAA TATCACTCGG ACAAGAGAAG AGTGAAGCTA ACAGCGATAA CGTGATGGTG ACGGTGAAGA AGAGCGATGT CGAGAAGCAG AGAGATATCA TCATTGGCTG GAAGAAGTTT GTCGCCGACA GGAAGAAGAC CAGTGGTATC TGTTAATCGA ATATTTACTT GAAAATATTT GAAGACTTTA TTAAATAATG CATTTGCATT GATTTGGATA TTTGAATGTT TCATTTCCCT TTATTGTTGA ACCAAATTTC ATTT 
Length1744
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6831445.. 6835302
Download Sequence
A.thaliana
AGI-codeAT5G17330.1
Descriptionglutamate decarboxylase
TAIR curator summaryEncodes one of two isoforms of glutamate decarboxylase.
Alias[GAD][GAD1][glutamate decarboxylase][GLUTAMATE DECARBOXYLASE 1]
Gene coexpression
MR
MR Locus Description
17.8326 Ahg478781 Glycosyl hydrolases family 32 protein
19.1572 Ahg485842 homolog of carrot EP3-3 chitinase
26.8328 Ahg488854 sulfate transporter 3;5
36.606 Ahg937805 phytosulfokine 4 precursor
37.0945 Ahg482539 Nucleotide-diphospho-sugar transferases superfamily protein
38.9615 Ahg483439 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
41.7493 Ahg939938 Protein of unknown function (DUF3133)
43.8406 Ahg929738
44.833 Ahg472692 Actin cross-linking protein
51.0294 Ahg925672 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression