Detail



ID : Ahg478781

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478781|fgenesh2_kg.3__1482__AT3G13790.1
Sequence
AAACCAGGCC AGAAAGAAAA TAAATACACA CAATGACCAA AGAAGTTTGC TCCAACATTG GACTTTGGTT ATTGTTCACG TTACTTATTG GTGACTATGT CGTCAATCTT GAAGCCTCGC ACCATGTTTA CAAGAGACTA ACCCAAAGCA CTAACATCAA ATCTCCTTCC GTAAACCAGC CCTACCGGAC AGGTTTCCAT TTTCAACCTC CAAAAAATTG GATGAACGGG CCTATGATAT ACAAAGGAAT ATATCATCTT TTCTACCAAT GGAACCCGAA AGGAGCTGTG TGGGGTAACA TCGTGTGGGC TCATTCCACG TCAACAGACT TAATCAACTG GAACCCACAT CCTCCAGCTA TCTTCCCATC TGCACCGTTC GATATCAACG GATGCTGGTC CGGTTCGGCT ACAATTCTCC CTAATGGCAA ACCGGTTATT CTATATACCG GAATCGACCC TAAGAACCAA CAGGTCCAAA ACATAGCGGA GCCTAAGAAT CTCTCTGATC CTTATCTCCG AGAATGGAAA AAATCGCCGT TAAATCCTCT GATGGCTCCT GACGCCGTTA ACGGAATCAA CGCCAGCTCG TTCCGTGACC CAACCACCGC GTGGCTAGGC CAAGACAAGA AGTGGAGAGT GATTATCGGA AGCAAGATTC ACCGTCGTGG ACTAGCGATT ACTTACACGA GTAAAGACTT TCTAAAATGG GAAAAATCTC CAGAGCCGTT GCATTACGAC GACGGAAGTG GAATGTGGGA ATGTCCTGAT TTTTTCCCGG TGACGAGATT TGGTTCTAAC GGCGTGGAAA CGTCTTCGTT TGGTGGACCT AATGAGATTT TAAAGCACGT GTTGAAAGTA AGCTTGGACG ATACGAAACA TGATTATTAC ACGATTGGTA CGTACGACCG GGTTAAAGAT AAATTCGTAC CGGACAATGG GTTTAAGATG GACAGTACGG CTCCAAGATA CGATTACGGG AAGTATTACG CGTCGAAAAC GTTTTATGAC TCTGGCAAGA ACCGGAGAAT CTTGTGGGGT TGGACTAACG AGTCATCGTC TGTTGAGGAT GATGTTGAGA AAGGCTGGTC CGGTATTCAG ACGATTCCGA GGAAAATATG GCTTGATCGA TCAGGGAAAC AATTAATTCA GTGGCCGGTT AGGGAAGTTG AAAGATTACG TACGAAACAA GTCAAAAACT TACGCAACAA AGTTCTAAAG TCAGGATCTA GGCTTGAAGT CTATGGTGTG ACAGCTGCAC AGGCGGATGT GGAAGTTTTA TTCAAAGTAA GAGACTTGGA GAAAGCGGAT GTTATAAAAC CAAGTTGGAC TGATCCGCAG TTGATTTGTA GCCAGATGAA TGTATCGGTT AAGTCTGGTT TAGGTCCATT CGGTTTAATG GTTTTGGCAT CTAAGAATTT GGAAGAGTAC ACATCTGTTT ATTTTAGAAT CTTCAAAGCT CGTCAAAACA GCGATAAGTA TGTTGTGGTC ATGTGCAGTG ACCAAAGCAG ATCTTCACTG GAGGAAGATA ATGACAAAAC GACCTACGGA GCTTTTGTGG ATATTAATCC TCACCAACCA CTATCCCTCA GATCCTTGAT TGATCATTCT GTAGTGGAGA GTTTTGGTGG AAAGGGGAGA GCATGCATTA CCTCAAGAGT GTATCCAAAA TTGGCAATAG GAAAAAGTTC ACATCTCTTT GCTTTTAATT ATGGATATCA AAGTGTTGAT CTCTTAAACC TAAATGCTTG GAGCATGAAC TCTGCTCAAA TCAGTTGATC AAGTAACGGG GAGATAGATA CACACATGTA AACACGTACA TTATATCTCC ATTGATTTAG CATTTATATG AGTTGATTTT GGAGAGATCT TATATGGTCC ACTTTGTTTG GTTGTCAAAA AAATGGTCCA ATTTGTTTGT TTGAAATAAT TCTAAAAGGC TATATATATG ACATTTTATT TG 
Length1962
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5354406.. 5357430
Download Sequence
A.thaliana
AGI-codeAT3G13790.1
DescriptionGlycosyl hydrolases family 32 protein
TAIR curator summaryEncodes a protein with invertase activity.
Alias[ATBFRUCT1][ATCWINV1][ARABIDOPSIS THALIANA CELL WALL INVERTASE 1]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg492803 FAD-binding Berberine family protein
11.7047 Ahg918888 Chitinase family protein
12.1244 Ahg496608 Peroxidase superfamily protein
15.7162 Ahg483607 uclacyanin 2
17.2916 Ahg889847 cysteine-rich RLK (RECEPTOR-like protein kinase) 11
17.8326 Ahg488599 glutamate decarboxylase
19.8746 Ahg485842 homolog of carrot EP3-3 chitinase
21.4476 Ahg312360 Protein of unknown function (DUF1262)
21.7256 Ahg941577 Raffinose synthase family protein
22.4944 Ahg920711 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression