Detail


ID : Ahg488606

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488606|fgenesh2_kg.6__1740__AT5G17410.1
Sequence
GAGCGAAGCA ATGGAATCAA TGACGCCAAT CTCGTGCCCT ACGACTCCTC GTTGGAACCA AGACAGGCCA TTTCTCACTG GTCGCTTTCA TCAGGAAACG AGGGCAAGCT CCAAATTTGC TGATTCTAAG AGGTTTACTT TAGACTCGTC TAGTTCTGGA GTAGAGCAGG CAATTGGCTG CTATGACACA CCGGTTCAGG AACTTATCGT CATTGATGAT CTCTTATCTG CGTTGGTTGG AATTGAAGGG AGATATATAT CAATTAAAAG ATTCCATGGG AAGGAAGATA GTATAGCTTT CCAAGTTGAC CCATCAATGG ATTTGGCACT ACAGGAATTG GCAAAAAGAA TATTCCCTTT ATGTGAATAT TATCTGCTGA TTGACCAATT TGTGGAGTCA AGCTCGCAGT TCAAGAACGG GCTAGTTAAC CATGCATTCG CGGCTGCACT CAGGGCACTC CTCCTTGATT ATCAAGCCAT GGTGGCACAA TTGGAACATC AATTTCGACT TGGAAGACTT TCTATCCAAG GATTATGGTT TTACTGTCAG CCCATGATGG GATCCATGCG CGCATTGGCT GCAGTAGTTC AGCAGGCTTC GACGAAGCAT TTTGTGGGTT CTGGTGTTCT TAATCTCTTG CAGAGTCAGG CTAAAGCGAT GGCTGGTGAT AATTCAGTGA GGTCATTGTT AGAGAAAATG ACGGAGTGTG CAAGCAATGC ATACCTGAGC ATATTGGAAA GGTGGGTCTA TGAAGGGATC ATTGATGATC CGTATGGGGA ATTTTTCATT GCCGAGAACA GGTCTCTTAA AAAGGAGAGC CTCAGTCAGG ACTCTGCAGC TAAATACTGG AGCCAAAGAT ACAGCCTCAA GGATACTATT CCTGGCTTCC TTGCAAACAT TGCTGCAACA ATATTGACCA CAGGGAAATA TCTAAACGTT ATGAGAGAAT GTGGGCACAA TGTTCAGGTT CCCATCTCAG AGAGATCTAA GTTAACAATA TTTGGTTCAA ATCATCATTA TCTTGAGTGC ATAAAGGCTG CTCACGAATT TGCCAGTATA GAGCTTGTGA ATCTCATCAA GGATAAGTAT GACCTAATTG GAAGGCTTCG ATCTATAAAG CACTATCTTC TTCTCGACCA GGGTGATTTC TTGGTTCATT TTATGGACAT TGCTCGAGAG GAGCTCAACA AAAAAGTGCA TGACTTATCT GTAGAAAAGT TGCAGTCTTT GCTAGATCTT GCTCTACGTA CCACAGCGGC TGCAGCAGAT CCTCGCCACG AAGACTTGAC TTGCTGTGTG GATCGAGCTT CATTGCTTAC AACTTTGGGA ATGCACAAGG ACCCTGATAG CAATAGTATT GAAGACCCAA TGAGCATCAC TGGTCTAGAG ACATTTTCCT TGAGCTATAA GGTTCAATGG CCACTATCTA TTGTCATATC AAAGAAAGCA TTGTCAAAGT ACCAGTTAAT TTTCCGCTTT CTTTTTCACT GCAAACATGT GGAACGCCAG CTTTGTGGTG CTTGGCAGAT ACATCAAGGG ATTCGGTCTA TGAACTCTAA GGGTACAGCA ATTCCTAGAT CATCGCTTCT CTGCCGTAGC ATGCTTAAAT TCATCAGTAG CCTTCTACAT TATCTTACAT TCGAGGTTCT CGAACCAAAT TGGCATGTGA TGCACGATAG ACTACAATCC ACAAGGAGTG TAGATGAGGT GATACAACAT CACGACTTTT TTCTTGATAA ATGTCTGAGA GGATGCTTGC TTCTTTTACC CGACGTCCTT AAGAAAATGG AGAAGTTGAA ATCAGTGTGT CTGCAATATG CTGCAGCCAC ACAGTGGTTG ATATCATCGT CTATCGACAT CAATAGCCAG TCTCATCCAC AGAAGACAAT GATAAGAGAC ACAACCGTTA CAGAGTCCAT ATTCAATTTC GAAAGGGAAT TCAACTCGGA GTTGCAGAGC TTAGGACCAG TATTGAGCAA AGGCTCCCAG GCTGAGCCAT ACTTGACTCA TCTCTCACAG TGGATCCTTG GTGTTTCCAA AGAATGAGAG GTGAGACTTT TACTAAACAA ACTCAGGATA TTCAGCTTGA GAAGTTGTTA TGAGATGTGT GCGTGTGTTT AGTCTTTTGT TGTCGTTTCT TTATTTTATT TGTGAATTTC CACGATATAA GAACAAGTCT CAGGCTCTCT CTGTTAAATA TTTGCATTCA AGATTTGTGT GGCTTCACTG CAACTAAAGT ATCTGTGAAT CTTTTACT
Length2258
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6855629.. 6861634
Download Sequence
A.thaliana
AGI-codeAT5G17410.2
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg907740
7.74597 Ahg324733 glutathione peroxidase 5
7.93725 Ahg496810 zinc ion binding
10.198 Ahg486507 alpha/beta-Hydrolases superfamily protein
13.8564 Ahg938262 Leucine-rich repeat protein kinase family protein
20.1246 Ahg492590 ACT domain repeat 7
24.1868 Ahg944731 ascorbate peroxidase 6
25.7876 Ahg481804 poltergeist like 4
27.2029 Ahg480538 HSP20-like chaperones superfamily protein
28.2843 Ahg496397 Embryo-specific protein 3, (ATS3)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression