Detail



ID : Ahg938262

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938262|scaffold_502453.1
Sequence
TTACCTTGTT GAAGTGATGT GATGTGGAAC AACCTGACTG GGCGTATTCC TTTGGAGATA GGAAGAATTT CTTCCTTGAA ACTCCTACTG TTGAATGGGA ACAAGTTCAC GGGTAGTTTA CCCCCTGAAC TTGGTAATCT TCAAAACCTA AACAGGCTTC AAGTAGATGA GAACAACATA ACAGGTTCAG TTCCATTTTC ATTTGGAAAC TTGAGAAGCA TAAAACATCT CCACTTGAAT AATAACACTA TAAGCGGAGA AATTCCGGTT GAGCTATCCA AATTGCCCAA GCTTGTTCAC CTGATTCTGG ACAACAATAA CTTGACTGGG ACATTGCCGC CAGAGTTAGC TCAATTGCCA TCCTTGACCA TACTTCAGCT GGATAACAAC AACTTCGAAG GTTCAACGAT TCCAGAGGCT TATGGAGACT TTTCTAGATT AGTAAAATTA AGTTTAAGGA ACTGTGGACT GCAAGGATCA ATTCCTGATT TAAGCAGGAT ACCAAATCTT AGCTATCTAG ACCTAAGTTG GAACAACCTC ACAGGGACTA TACCAGAATC CAAGCTTTCT GACAATATGA CAACAATTGA ACTATCTTAT AACCAACTAA CTGGATCTAT ACCACAAAGT TTCTCAGAGT TGGGCTCTCT TCAATTACTG TCACTTGAGA ACAACAGTTT ATCTGGTTCT GTCCCAACAG AAATTTGGCA GGACAAGTCT TTCGAGAATA ACAAGCTGCA AGTTGATCTC AGAAACAACA ACTTCTCTGA TGCCACAGGA AACCTGAGAA CACCAGACAA TAATGTCAAA GTATCCCCAG GAATCTGCTT GTGTACAGCA CCTCTTTCGA TTGATTATAG GCTAAAGAGC CCTAGCTTCT TTTTCTTCAC TCCATATATT GAACGCCAAT TCAGGGAGTA TATTACCTCG TCCCTCCAAT TGGAGACTCA TCAACTAGCA ATTGATAGAC TTCTTGATGA GAACAGGCTG CGTCCAAGGA TGTACCTAAA GCTAGTCCCC AAAGGCAAAA TAACATTTAA CAAGAGTGAA GTCATACGTA TCAGGGACAG GTTTATGTCA TGGAGTTTTA ATAAAACTGA CTTTTTTGGA CCCTATGAAC TGCTGGACTT CCCTCTTCAA GGACCGTATG GCTCTATTGT CACTGCCACT GTTATTTCAG TGAGTGCAAC ACTTCTATAT GTTAGGAAAC GTCGTGACAA ATCCCATACA CTCACCAAAA AGCGTTTTTT CAGAGCAATA TCTCGGGAAA TTAAAGGGGT GAAGAAGTTC AGTTTTGTAG AACTGTCGGA TGCAACTAAT GGTTTTGATA GCTCCACAAT GATCGGTAGA GGTAGCTATG GAAAGGTCTA CAAAGGCATT TTGCCAAATA AAACTGAAGT TGCCATCAAA CGAGGAGAAG AAACTTCTCT GCAGAGCGAG AAAGAGTTTC TGAATGAGAT CGATCTGCTT TCGAGGTTAC ATCACCGAAA TCTTGTGTCG CTTATTGGCT ACAGTAGTGA TATCGGGGAA CAGATGCTGG TATATGAGTA TATGCCTAAT GGCAATGTGC GTGATTGGCT TTCAGTGGTT TTACATTGTC ATGCAGCTAA TGCTACAGAC ACATTGAGCT TTAGTATGAG GTCACATGTG GCGTTGGGTT CAGCTAAAGG GATTCTTTAC CTTCACACTG AAGCAAATCC GCCTGTTATT CACCGCGATA TCAAAACCAG CAACATACTC TTGGACTGTC AGCTTCGTGC TAAAGTTGCT GATTTTGGAC TGTCACGGTT GGCTCCTGCT TTTGGGGAGG GAGATGGTGA GCCTGCCCAT GTATCAACCG TAGTAAGAGG AACACCGGGA TATCTGGATC CAGAATACTT CATGACTCAG CAATTGACGG TGAAGAGCGA TGTGTACAGC TTCGGAGTAG TATTGCTTGA GCTTTTGACT GGAATGCACC CATTCTTTGA GGGTACACAT ATTATCCGCG AGGTACATTT CTTGACTGAG CTCCCACGTA AACCTGATAA TGGAGTGAGG ACGGCGAATG AATGTGGAAC GGTTTTGTCA GTGGCGGATA GTCGGATGGG ACAATGTTCG CCCGATAAAG TGAAGAAGTT GGCGGAATTA GCGTTATGGT GTTGTGAGGA TAGACCAGAG ACGAGACCAC CAATGTCAAA AGTGGTGAAG GAACTTGAAG GTATTTGCCA ATCTGTGCGA GAACCCGAAA TGTTCTCAGA AACAACGAAA TTGCTCTGCA CCAAAACATC GCCGTCATCT TCTTCCGTAC CCTCGCCATT GTCTTTACTT CCTGGAAGTG ACTTGGACAG TGGCTTTTTC CACGCTGTAA AACCTCGTTG ATATATAATT GTGTGAGATA G 
Length2381
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15733940.. 15738223
Download Sequence
A.thaliana
AGI-codeAT3G53590.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg921956 Protein of unknown function (DUF688)
4 Ahg950152 potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
5.47723 Ahg474776 lipoxygenase 1
6 Ahg483567 DNA-binding bromodomain-containing protein
13.8564 Ahg488606 Spc97 / Spc98 family of spindle pole body (SBP) component
15.3297 Ahg492898 RING/U-box superfamily protein
15.9687 Ahg482159 EXS (ERD1/XPR1/SYG1) family protein
16.6733 Ahg494005 Ribosomal protein S4
17.9444 Ahg481833 pumilio 3
19.0788 Ahg476358 Leucine-rich receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression