Detail



ID : Ahg488617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488617|fgenesh2_kg.6__1751__AT5G17510.1
Sequence
ATGGAGGACA CGAAGCCACC ACCATTGGGA GGTAACAATC CTCAGCAGCA GCAGCAGCAG CAACAACAAC AACTTCTCTA TCAACACCAA TTACAACAGC GACAACAACA AATGCTTCTC TTGCAACAAT TGCAAAAGCA GCAACATCAA CAACAGCAAC AAGCAGCAAT GTCTAGATTC CCATCGAACA TCGACGTTCA TCTCCGTCCA CCGGGTTTGA TTCAGAACCG ACCCATTAAT CCTCCGCCTC AGCAGAATCC TAACCCTAAC CCTAATTTGG GACAACATAC ACCGAATTTT CAACAGCAGC AGCAGGTTGT ATCGAGCCAG CAGATGATGC AGCAGCAACA ACAACAGCAG CAGCAGAAAT TGATGCGGCC ATTGAATCAC ATCGAGCTTC AATGCGCTTA TCAGGACGCT TGGCGTGTTT GTCACCCGAA TTTTAAACAA CCTTTCTCTT CTCTTGAAGA TGCTTGCGAG AGATTATTAC CATATCATGT CGTAGCAGAT TACGAAGCAG AAGAGGATGA TAGAATCCTT GATTCGGATC CAACAGGCCA GGCCTTATCT CGCTCTCAAC AATGGGATAA TAACATTGCT GCTAAAGTTG CTGAATTCAC GGCAACGTTT GAGAAACAAG CCCTAGCTTT TAACATAATA ACTCGAAAGC GAGGAATGGG AGAATTCAGA TCTGAGGAAA GGTTGATGGT AGAACAAGCT TTGCTACAAG AAGAAAGGAA ATCGTTGATT GAACTGAAAG CAGAAATGGA TAGGGAGAAG GCTGGCCGGG AGGCTCAGGA GGCTAAGCTG CGGATGGCGG CTTTAGCTCA AGCTGGACAG TCTCAATCTC ATGCTGAGAT AATGGCTCGT AATCCATTGA GGGCTAATGC GGTTGGGAAT CAGGGCAGTA ATATTCAGCT TAGCCATGAG ATGGGGGAAC AGGGACGTAA CATGAACCCT GATGAGATGA TGAATGGATG GGGAAACAAC AGCCAGAGAG AGGACAAGGA ACCTTCAGAA GATTTCTTGA ATGATGAGGA GAATGAGAAT GGAGAGACAG GGGAACAAGA AAACTGGCGT GAGGCAGGAG AATTTGATTT GAATAGCCGG TAAATGACCA AGGTGAAGAC TATTTGCAGT CTCATGTACT CGAAACTAGA AAGGAAATTA CAGCTGCTCT TGATATCACT CAGATAAGTA GATTCAAGCT GCTATATATA CCGGGTTCAG GTCAAGTATA TGGGTACCAG ATGATGGTTC CAAGTAAGCA TTGATTGTAT CTGTTTAATG TTTTGTAGCT TAAGTTAGAT GTGTGCATTA CATGTTGATG ATTAGTGTCT TCATGATACA TGGAGATGGA GAGGCTGGTT ATCTATAACT GAATCTTGTA AAAGGTGTAA GAGAACCAGA TAATAAAGCT TAGTAGCTAA GATAGTTAAT ATATATGTAA GTTACTATTA CAGAATTGTA TTGGCCATGT AT 
Length1482
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6900624.. 6902828
Download Sequence
A.thaliana
AGI-codeAT5G17510.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.68115 Ahg484401 Melibiase family protein
7.74597 Ahg479051 NUP50 (Nucleoporin 50 kDa) protein
15.4919 Ahg488911 Uncharacterised protein family (UPF0041)
15.7162 Ahg473468 ubiquitin-specific protease 11
21.9089 Ahg475268 RNA polymerase I subunit 43
22.2486 Ahg328440 glycine-rich protein
22.8473 Ahg939865 Enhancer of polycomb-like transcription factor protein
25.6905 Ahg909351 Zinc finger C-x8-C-x5-C-x3-H type family protein
25.9808 Ahg494930 RING/U-box superfamily protein
26.1151 Ahg474570 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression