Detail



ID : Ahg328440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|328440|fgenesh1_pm.C_scaffold_7000667
Sequence
ATGATTTCGA TTTCAATGGT GAGATTCTGT CTCTGTTTCG TCTTCTTCAT CTTCATATCT GCAAATCCGA AATTAATCAA TTCGTGGGAT GAGACTGCGA TTAGATTCGA ACCGCCGTCA CCTTCACCGG CGCCGGAGCC TTCGTCGGTT TCATGTGTGG ATGACCTAGG AGGTGTTGGC TCTTTAGATT CCACGTGTAA GCTCGTCGCT GATTTGAATC TCACACGTGA CCTAAACATC ACCGGTAAAG GTAATCTCCA CGTTTTGCCT GGTGTTCGAT TGGTTTGCCA GTTTCCGGGA TGTTCGATTA GTGTCAATAT CTCCGGGAAT TTTTCATTGG CTGAGAATTC TTCGGTTCTC GCCGGAACTT TCCGTCTCGC GGCGGATAAC GCTGAATTTG GGGTAAATTC GGCCGTGGAC ACCACTGGAT TGGCTGGGGA ACCGCCGCCG GAGACTAGCG GTACGCCGGA GGGAGTGGAA GGTGCCGGTG GAGGATACGG TGGAAGAGGT GCGTGTTGTT TGTCGGATAC TACCACGAAG ATTCCGGAAG ATGTGTTCGG TGGTGATGTT TACGGTTGGT CGTCACTGGA GAAGCCGGAG ATTTATGGTA GTAGAGGTGG TTCGACGAGT AATGAGGTTG ATTACGGTGG AGGTGGCGGC GGAACGGTGG CGATAGAGAT ATTAGGGTAT ATAAGTTTAA ACGGCAGCGT TTTAGCTGAT GGGGCCAGTG GTGGAGTTAA AGGTGGTGGT GGGTCCGGCG GCAGCATCTT CGTTATGGCT CATAAAATGG CAGGAAATGG TCGTTTAAGT GCATCTGGAG GTGATGGGTA TGCTGGTGGA GGTGGTGGAC GGGTATCGGT CGATATATAC AGCCGCCATT CTGACCCAAA AATCTTTTTC CATGGAGGTA GTAGTTTTGG TTGTCCAGAA AATGCTGGGG CTGCTGGGAC TATGTATGAT GTTATTTCAG AGAGCTTAAC CATCGACAAC CACAATAAGA CAACAGTTAC GGACACTCTT CTCCTGGAGT TCCCTAACCA TCGCCTTTTC ACTAATTTGT ATATCCGAAA TATGGCAAAG GTTGCTGTTC CCCTGCGTTG GAGCCGTGTC CAGGTTCAAG GATTGATAAG TTTGTCGAAT GGTGGAGAGT TGAACTTTGG TCTTCCACGT TATGCTTCCT CAGAATTTGA ATTATTTGCT GAGGAACTCT TGATGAGTAA TTCTGCTATC AAGGTTTACG GGGCTTTACG TATGACAGTC AAAGTGTTCT TGATGTTGAA GTCAAGAATG TTTATAGATG GAGGTGGTGT GGCAATATTA GGAACTTCAA TGCTCGAAAT TAGTAATCTG TTGGTGCTCA AGGAGTCATC TGTGATACAA TCCAATGGGA ATCTCGGAGT ACATGGGCAG GGTCTGTTGA ATCTAACAGG CACAGGAGAT ACAATTGAAG CACAGCGTCT GATTTTGTCT CTGTTTTATA GCATCCAGGT TGGAGCCGGA GCGGTTCTGC GTGGTCCTTT GCAGAATGCA TCAACTGGTG GCCTTACTCC AAAGCTTTAC TGTCAACGCC AAGATTGCCC TGTTGAACTA CTCCACCCGC CGGAGGATTG CAATGTCAAT TCATCCCTTC CATTCACTCT TCAGATCTGC CGAGTTGAGG ATATTACTGT TGAAGGTCTC ATCAAAGGAT CTGTCATCCA GTTCCATCTG GCAAGAACGG TAGTTGTCCG CTCTTCTGGA ACAATATCCG CAGACGGGAT GGGCTGCAAA GGTGGAGTTG GGACTGGTAG ATTTCTGAGA AGCGGTATTG GGAGTGGTGG TGGACATGGT GGTAAAGGCG GAAGCGGGTG TTACAATCAT ACTTGCATCG AGGGTGGCGA GTCTTATGGA AATGCAGACC TACCATGTGA ACTTGGCAGC GGAAGTGGAA ATGAAGAGTC AACAGATTCA GTTGCTGGTG GAGGAATCAT TGTGCTTGGT TCACTTGAGC ACCCACTTTC AAGCTTGTCA CTGGAAGGCT CAATAACAAC TGATGGTGAA AGTCCCAGGA AGACGCTGAA AGGCCTAAGT AATTCAAGTC TAGGACCTGG TGGTGGTTCA GGTGGAACCG TACTTTTATT CTTGCGCACA CTTGAGATAG GGAGGTCTGC GATCCTCTCT AGTATTGGAG GAAATGGTAG CCTAAAGGGA GGTGGTGGAG GGAGTGGTGG AAGGATTCAT TTTCATTGGT CAGACATTCC CACTGGTGAT GTCTATCATC CTGTTGCCAT AGTAAAGGGA AGAGTTTATG TAAGAGGAGG GATGGGTATT ATTGAAGATA ACGTTGGAGG GAATGGAACT TTGACTGGCA AAGCTTGTCC AGAAGGGCTC TATGGTTTAT TTTGCGAGGA ATGTCCATCT GGCACTTATA AGAACGTCAC TGGATCAGAT AAAGCTCTTT GTCATCTTTG TCCGGCTAAT GATCTTCCTC ATCGTGCTGT ATATGTCACT GTTCGAGGCG GTGTTGCAGA AACGCCTTGT CCATATAAAT GCATTTCGGA TAGATACCAC ATGCCACACT GTTATACTAC ACTTGAAGAG TTAATATACA CATTTGGTGG ACCCTGGTTG TTTGGTGTTC TTTTAGTAGT TGTGCTCCTC CTATTAGCAC TTGTTTTCAG CGTCGCCAGA ATGAAATTTG TTAGCGGTGA CGAATTACAT GGGTCTGCCC CGACCCAGCA TGGCTCTCAG ATTGATCACT CATTTCCTTT CCTCGAGTCG TTGAATGAGG TGATGGAGAC GAACAGAGTG GAGGAGTCAC AGGGCCACAT GCATAGGATC TATTTCTTAG GTCCTAATAC TTTCAGTGAA CCTTGGCATC TTTCTCATAC ACCCCCAGAG GAAATAAAAG AGATTGTGTA CGAGGCTGCG TTTAATGGGT TTGTTGATGA GGTCAATGTT ATAGCTGCAT ACCAGTGGTG GGAGGGTGCG ATTTACATTG TGCTTTCAGT TCTAGTCTAT CCTCTTGCAT GGTCATGGCA GCAATCCCGC CGGAGGCTGA AATTTCAGAA ACTCCGTGAC TTTGTTAGAT CAGAATATGA CCATTCTTGT CTACGCTCGT GTCGTTCAAG GGCATTATAT GAAGGTCTAA AGGTAGCTGC TACTCCTGAT TTAATGTTAG CTCATCTAGA TTTCTTCCTT GGTGGCGATG AAAAGAGAAG TGACCTTCCT CCTCCGGTTC ATCAAAGACT TCCAATGCCT TTAATATTTG GAGGCGACGG AAGTTACATG GCCTATTACT CACTCCAAAG TGACGATATT CTGACCAGTC TTCTGAGCCA GTTGGTCCCA CCAACCACTT GGTACCGCTT TGTGGCTGGT CTGAACGCTC AGCTGCGTCT GGTTCAGCAA GGGAAACTGA GGTCCACGTT TCGCTCTGTT ATGAGATGGA TTGAAACTCA TGGAAACCCA GCTTTGAAAA GACATGGTGT ACGTGTCGAC CTAGCTAGAT TTCAGGCATT GTCTTCGTCG TCTTGCCAGT ATGGAATCCT TGTTCACACC ATTGTAGATG AAGATGCGTC AACAAGAACT GATGATGAAA CAGAACAGCA GCACCCATGG GGGACACAAA TTGAAAACTC CTCTGGTGAT TTCAGGGAGA ATTTTCAACC TCTAAGAAGC GAAATCAACC ACGTAAGGCA TCGAGAGTGT GGAGAAATCA TAGACATTGG AAGCTTACAA TATCTCAAAG AAGATAAAGA TGTTCTTTCC CTCATCTCCT TCTTGATTCA TAATACAAAA CCTGTTGGCC ACCAGGATCT GGTCGGTTTG GTTATCTCGG TGCTACTCCT AGGAGATCTA ACTTTAATGT TACTCACGCT GCTCCAACTC TACTCGATAT CTTTGCTGGA AGTTTTTCTC GCTATGTTTA TTTTACCTCT CAGCATCATT TTCCCATTTC CTGCCGGGGT CAGCGCTTTG TTTAGCCACG GACCAAGGCG CTCTGCTGGT CGCACACGCG TTTATGCATT GTGGAACGTC ACATCCTTGG TCAATGTCGT TGTTGCGTTT GTGTGTGGAT ATGTTCACTA TCATGGCTCA TCATCTGGGA AAAAGATCCC GTATCTCCAG CCATGGAACA TAAGCATGGA CGAGAACGAA TGGTGGATAT TCCCAGTCGC TTTGTTTCTA TGCAAAGTCT TGCAATCCCA ACTCGTAAAC TGGCACGTTG CAAACCTCGA GATACAAGAT TACTCCTTGT ACAGTGATGA CTCAGAGGTG TTCTGGCAGT CGTGA 
Length4275
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3316267.. 3323995
Download Sequence
A.thaliana
AGI-codeAT4G32920.1
Descriptionglycine-rich protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.18535 Ahg479149 TOPLESS-related 2
9.79796 Ahg937129 metalloendopeptidases;zinc ion binding;DNA binding
10.0995 Ahg933239 Ring/U-Box superfamily protein
10.247 Ahg477986 importin alpha isoform 1
10.6771 Ahg325480 vacuolar protein sorting-associated protein 20.2
17.3205 Ahg472118 DDT domain superfamily
18.9737 Ahg491138 Transducin/WD40 repeat-like superfamily protein
22.2486 Ahg488617
25.2982 Ahg925171 amino acid permease 1
26.7395 Ahg487697 transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression