| Annotation |
|---|
| Description | jgi|Araly1|488656|fgenesh2_kg.6__1790__AT5G17920.1 |
| Sequence |
AGCACCACCA GATCTACACA AATTACACAG AGCCCAACGA TGTATCATTT TTGGCTATAA ATAGACTCAC AGAGCCCACT CTTGTTCCTC GCTCTCTCTT TCGCCTTCTC TTAGCCAACC CTTTTTCCTT CTCCTCTCCG ATTCTTCCTC CGTCAGTAAA AGAAAATCAA AATGGCTTCA CACATTGTTG GATATCCACG TATGGGCCCT AAGAGAGAGC TCAAGTTTGC TTTGGAATCT TTCTGGGATG GTAAGAGCAC TGCTGAGGAT CTTCAGAAGG TGTCTGCTGA TCTCAGGTCA TCCATCTGGA AACAGATGTC TGCGGCTGGG ACTAAGTTCA TCCCAAGCAA CACCTTTGCT CACTACGACC AGGTTCTCGA CACCACCGCT ATGCTCGGTG CTGTTCCACC TAGATATGGT TACACTGGTG GTGAGATCGG GCTTGATGTT TACTTCTCCA TGGCCAGAGG AAATGCCTCT GTGCCTGCTA TGGAAATGAC CAAGTGGTTT GACACCAACT ACCATTACAT CGTCCCTGAG TTGGGCCCTG AGGTCAACTT CTCTTACGCA TCCCACAAGG CGGTGAATGA GTACAAGGAG GCCAAAGCTC TTGGTGTTGA CACCGTCCCT GTACTTGTTG GCCCAGTCTC TTACTTGCTG CTTTCCAAGG CTGCCAAGGG TGTTGACAAG TCATTTGATC TTCTTTCTCT TCTCCCTAAA ATTCTCCCGA TCTACAAGGA AGTGATTACC GAGCTTAAGG CAGCTGGTGC CACCTGGATT CAGCTTGACG AGCCTGTCCT TGTTATGGAT CTTGAGGGTC ACAAACTCCA GGCCTTTACT GGTGCCTATG CTGAACTTGA ATCAACTCTT TCTGGTTTGA ATGTTCTTGT CGAGACCTAC TTCGCTGATA TCCCTGCTGA GGCATACAAG ACCCTAACTT CATTGAAGGG TGTGACTGCC TTTGGTTTTG ATTTGGTTCG TGGCACCAAG ACCCTTGATT TAGTCAAGGC AGGTTTCCCT GAGGGAAAGT ACCTCTTTGC TGGTGTTGTT GATGGAAGGA ACATCTGGGC CAATGACTTT GCTGCGTCTC TCAGCACCTT GCAGGCACTT GAAGGCATTG TTGGTAAAGA CAAGCTTGTG GTCTCAACCT CCTGCTCTCT TCTCCACACC GCTGTTGATC TTATCAATGA GACTAAGCTT GATGATGAAA TCAAGTCATG GTTGGCGTTT GCTGCCCAGA AGGTTGTTGA AGTGAACGCA TTGGCTAAGG CTTTGGCTGG TCAGAAGGAT GAGGCTCTTT TCTCTGCCAA TGCTGCGGCT TTGGCTTCAA GGAGGTCTTC CCCAAGAGTC ACCAACGAGG GTGTCCAGAA GGCTGCTGCT GCTTTGAAGG GATCTGACCA CCGTCGTGCA ACTAATGTTA GTGCTAGGCT AGATGCTCAG CAGAAGAAGC TCAACCTCCC AATCCTGCCA ACCACAACCA TCGGATCCTT CCCACAGACC GTAGAGCTCA GGAGAGTTCG TCGTGAGTAC AAGGCGAAAA AGGTCTCTGA GGAGGACTAC GTTAAGGCCA TCAAGGAAGA GATCAAGAAA GTTGTTGACC TCCAAGAGGA ACTTGACATC GATGTTCTTG TCCACGGAGA GCCAGAGAGA AATGACATGG TTGAGTACTT CGGGGAGCAG TTGTCTGGTT TTGCCTTCAC TGCAAACGGA TGGGTCCAAT CTTATGGATC TCGTTGTGTG AAGCCACCAG TTATCTACGG TGATGTGAGC CGTCCCAAGG CAATGACCGT CTTCTGGTCC GCAATGGCTC AGAGCATGAC CTCTCGCCCA ATGAAGGGTA TGCTTACCGG TCCCGTCACC ATTCTCAACT GGTCCTTCGT CAGAAACGAC CAGCCCAGGC ACGAAACCTG TTACCAGATC GCTTTGGCCA TCAAGGACGA AGTCGAGGAT CTTGAGAAAG GTGGAATCGG TGTCATTCAG ATTGATGAGG CTGCACTTAG AGAAGGACTA CCACTCAGGA AATCCGAGCA TGCTTTCTAC TTGGACTGGG CCGTTCACTC CTTCAGAATC ACCAACTGTG GAGTCCAAGA CAGCACCCAG ATCCACACTC ACATGTGCTA CTCCCACTTC AATGACATCA TACACTCCAT CATCGACATG GATGCTGATG TCATCACCAT TGAGAACTCC AGGTCTGACG AGAAGCTTCT CTCCGTGTTC CGTGAAGGAG TGAAGTACGG TGCTGGAATT GGTCCAGGAG TCTACGACAT CCACTCTCCA AGAATACCAT CTTCTGAGGA AATCGCAGAG AGGGTCAACA AGATGCTTGC TGTCCTAGAG CAGAACATCC TTTGGGTCAA CCCTGACTGT GGTCTCAAGA CCCGTAAGTA CACCGAGGTT AAGCCTGCGC TCAAGAACAT GGTTGATGCG GCCAAGCTCA TCCGTTCCCA GCTCGCCAGT GCCAAGTGAA GAAAAGCTTG ATTTGAACAA GGAAAACGTC TTTTTTTTTC TAAAATGGTT GTGTTTTATT TGCTTTAATA ACTTTCTTAA AAATATCTTT AGTCGAAGTT AGATTTGATA CATATGGTTT CTTTCTTGTT GAGAGAGAGG GATGATATGG CATCCTTTGG ATTTGCTGCA ATGTTTGTGA TTTTCTTTTT GTCTCCAATA TATTTCTCTG ATGGAATGTC TTTTTTTCTA AAGTCTCTTG AAAAGGAATA AGAGGATTGA TTCTTATACA AATACTTTTG TTTGCGTCGT CC |
| Length | 2762 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7088861.. 7093269 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G17920.1 |
| Description | Cobalamin-independent synthase family protein |
| TAIR curator summary | Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. |
| Alias | [ATCIMS][ATMETS][ATMS1][COBALAMIN-INDEPENDENT METHIONINE SYNTHASE][methionine synthesis 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg494557 | tubulin alpha-2 chain |
| 2.44949 |
Ahg947029 | S-adenosyl-L-homocysteine hydrolase |
| 3.4641 |
Ahg478157 | ADP/ATP carrier 1 |
| 3.87298 |
Ahg478059 | auxin-responsive family protein |
| 4.89898 |
Ahg474136 | tubulin alpha-2 chain |
| 6.48074 |
Ahg913528 | Cobalamin-independent synthase family protein |
| 7.74597 |
Ahg934322 | methionine adenosyltransferase 3 |
| 7.87401 |
Ahg487711 | ATP synthase alpha/beta family protein |
| 9.8995 |
Ahg478305 | adenosine kinase 1 |
| 10.9545 |
Ahg486312 | ketol-acid reductoisomerase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|