Detail



ID : Ahg947029

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947029|scaffold_703258.1
Sequence
CAAATCTCAG ATCTAGAAAA ATGGCGTTGC TCGTCGAGAA GACCTCAAGT GGCCGTGAAT ACAAGGTCAA AGACATGTCT CAAGCCGATT TCGGTCGTCT CGAACTCGAG CTCGCCGAAG TTGAGATGCC TGGACTCATG GCTTGTCGTA CCGAGTTCGG ACCTTCTCAA CCATTCAAAG GCGCTAGAAT CACCGGATCT CTTCACATGA CGATCCAAAC CGCCGTACTC ATCGAAACCC TAACTGCTCT CGGTGCTGAA GTCAGATGGT GTTCCTGCAA CATCTTCTCT ACTCAAGACC ACGCCGCCGC CGCAATCGCT CGTGACTCCG CCGCTGTTTT CGCCTGGAAA GGTGAGACGC TTCAGGAGTA TTGGTGGTGT ACGGAACGTG CTCTTGATTG GGGTCCAGGT GGTGGTCCTG ATCTGATTGT TGATGATGGT GGTGATGCTA CGCTTTTGAT CCATGAGGGT GTTAAAGCTG AAGAGATTTT TGAGAAGACT GGTCAAGTTC CTGATCCTAC TTCTACTGAT AACCCTGAGT TTCAGATCGT GTTGTCTATT ATCAAGGAAG GTCTTCAGGT TGATCCTAAG AAGTACCATA AGATGAAGGA GAGACTTGTT GGTGTCTCTG AGGAAACTAC TACTGGTGTT AAGAGGCTTT ATCAGATGCA GGAAAATGGA ACTCTCTTGT TCCCTGCCAT TAACGTCAAT GACTCTGTCA CCAAGAGCAA GTTCGACAAT TTGTATGGTT GCCGTCACTC ACTTCCTGAT GGTCTCATGA GGGCCACTGA TGTTATGATC GCTGGAAAGG TTGCTGTTAT CTGTGGATAT GGTGATGTTG GAAAGGGTTG TGCTGCTGCC ATGAAGACTG CTGGTGCTAG AGTCATTGTG ACTGAGATTG ATCCCATCTG TGCCCTTCAA GCTTTGATGG AAGGACTTCA GGTTCTTACC CTTGAGGATG TTGTCTCTGA AGCTGATATC TTTGTGACCA CTACTGGTAA CAAAGATATC ATCATGGTTG ACCACATGAG GAAGATGAAG AACAATGCTA TTGTGTGCAA CATTGGTCAC TTTGACAACG AGATCGACAT GCTCGGATTT GAGACTTACC CTGGTGTTAA GCGTATCACC ATCAAGCCCC AGACTGACAG GTGGGTGTTC CCAGAGACAA AGACCGGAAT CATTGTCTTG GCTGAGGGTC GTCTCATGAA CTTGGGTTGT GCCACTGGTC ACCCAAGTTT CGTGATGTCT TGCTCTTTCA CCAACCAGGT GATTGCCCAG CTTGAGCTCT GGAACGAGAA GTCAAGCGGT AAGTACGAGA AGAAGGTGTA CGTTCTTCCC AAGCATTTGG ATGAGAAGGT TGCAGCACTT CACTTGGGCA AGCTTGGAGC CAGGCTTACT AAGCTGTCAA AGGACCAATC TGACTACATC AGCATTCCAA TTGAGGGACC ATACAAGCCT CCTCACTACA GGTACTGAGA GAGAGAGAGA GTGGACAA 
Length1498
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13604181.. 13605915
Download Sequence
A.thaliana
AGI-codeAT4G13940.1
DescriptionS-adenosyl-L-homocysteine hydrolase
TAIR curator summaryEncodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.
Alias[ATSAHH1][EMB1395][HOG1][MEE58][SAH1][SAHH1][S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1][EMBRYO DEFECTIVE 1395][HOMOLOGY-DEPENDENT GENE SILENCING 1][MATERNAL EFFECT EMBRYO ARREST 58]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg478157 ADP/ATP carrier 1
2.44949 Ahg488656 Cobalamin-independent synthase family protein
3.16228 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
5.2915 Ahg947030 serine hydroxymethyltransferase 4
6.16441 Ahg483845 zinc transporter of Arabidopsis thaliana
6.16441 Ahg496177 GTP binding Elongation factor Tu family protein
7.34847 Ahg477673 glyceraldehyde-3-phosphate dehydrogenase C subunit 1
7.54983 Ahg487029 heat shock cognate protein 70-1
8.30662 Ahg938186 Aldolase superfamily protein
10.7703 Ahg478235 Ribosomal protein L10 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression