Detail


ID : Ahg488738

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488738|fgenesh2_kg.6__1872__AT5G18550.1
Sequence
GAAAGATCAA AACTTCCCCA TCCCTCTTCC AAAATCCATC CCTCAAAAAA AATAAAAAAA AATACTCCTT TCGAAATTTC GCAAAAAAAA TCGAAGCCGA AAAAAAAAAA AAAGTTTCAG CTTTAAGGAA AGAGATCAAG CGACTGAGAG TGGTGTGGAG ACAGAACCAA CCACGATCTG TGGTTTTTTT TTTTTTTCTT CCTTTCTCCA ATCTCAGGAA GAAAAAAAGT TTCTTCCCGA CACTCCCATT TGATCGGAGA GCTCGACATT GGTGGGTTCT GTTTCGCGGC TCCGGCTAAA GGTTAGGGTA AAACAAAAAT GGAGCGGTAC GGTGGCGCCG GAGAAGATGA GTCGCGGTCG GATCCATCAC ATGAATGGTC CGCTCCAGGA ACCGAAACCG GTATCGAAGC TTCGATGTGG CGGTTAGGGT TGCGAGGCGC TGGAGGTGGA GGTGAATCGT TCCCGGAGCG ACCCGATGAA CCCGATTGTA TCTATTTTTT ACGAACCGGT GTTTGCGGGT ACGGGTCTAG ATGTCGGTTC AATCACCCAC GAAACCGTGC TCCGGTCTTG GGAGGTCTCA GAACAGAAGC TGGAGAATTC CCTGAGAGAA TGGGACAGCC TGTGTGTCAG CATTTTATGC GAACAGGAAC ATGTAAATTC GGTGCTTCTT GTAAGTATCA CCATCCTAGA CAAGGAGGAG GAGGAGGAGA TTCTGTTACT CCTGTCTCAC TAAATTACAT GGGATTTCCA TTACGCCCGG GGGAGAAAGA ATGCTCCTAT TTCATGAGAA CCGGTCAGTG TAAATTCGGT TCCACCTGTC GATATCACCA TCCCGTCCCT CCTGGTGTAC AAGCTCCATC GCAGCAGCAA CAACAGTTAT CCGCTGGTCC AACTATGTAT CAATCGCTTC AGTCTCAACC CGTTCCTTCA TCGCAGCAAT ACGGAGTAGT TCTAGCAAGA CCTCAGCTTT TACCAGGCTC CTATGTTCAA AGCCCTTATG GTTACGGTCA AATGGTTCTT CCTCCCGGTA TGGTTCCATA CTCGGGCTGG AACCCTTACC AGGCTTCTGT AAGTGCCATA CCTTCTCCTG GGACTCAACC GTCAATTGGA ACCAGCTCTG TTTATGGAAT TACGCCGTTA TCTCCTTCAG CGCCTGCCTA TCAATCCGGT CCATCTTCTA CGGGTGTTAC AAATAAGGAA CAAACTTTTC CTCAGCGACC TGAACAACCC GAATGTCAAT ACTTTATGAG AACCGGAGAT TGTAAATTCG GATCCTCATG CAGATTCCAT CATCCTATGG AAGCAGCATC GCCCGAGGCA AGTACCCTCA GCCACATTGG CCTCCCACTT CGTCCCGGCG CAGTGCCATG CACTCACTTT GCGCAACACG GTATTTGCAA GTTTGGGCCT GCCTGCAAAT TTGACCACTC CTTGGGCTCT TCTTCACTAA GCTACAGCCC ATCCCCCTCT TCTCTCACGG ACATGCCCGT CGCACCTTAC CCTCTCGAGT CCTCCTCGCT CGGCACATTA GCTCCATCAT CATCATCATC CTCATCTGAC CAACGCACTG AGCTTCTCTC TTCCAGCTCT ATTGAACCTA TAACCACAGC AACAAGTGGC TCAGAAACTG TGGCTGCTGG AGTCTCTTCT TCTTCTTCTA TGACCAGCGG TGTTAGCCAT CCCGAGCCTG CTGAGACCGA TAAAGGTGAC TCAGCTAGCA TTGAGGCTAA GACTTCAAGT TAAAGAGACA AATCTCAAAG GAGGGAAGAG AATCTCTCTC TAATCTTCTT AGATTATTCA TCTCTCTTAT TCTCTCTATC TCCCTTCTTC TTTTCATCAA ACTTTCATGA ACTCAGGAAC ATAAAAAGGA TATTTTTTGG GCGGAGAGAC AGCAATAGGT AACAACGCAG AGAGATAGAC AAAAGGAGCT CTCTCTACTC CTCTGTGTTA TGTCTCTCCT CTTAGGTCTC TCTTACCATG TTCATATTAT TCCTTCATAC GGCCATCTCT CTGTCTTTTG TTGTTTTTTT CTTTTCTTTT TGGAAACGTT GATTAATAAA ATGGCCTTAT ATATATTCAC AACAATCCCC TGTTTATTTT TCAAAAGTTT TATGGAATAT TGGAATTAAC TAATTAAGAG TCCAATTTTT AT
Length2152
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G18550.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12 Ahg473885 Protein phosphatase 2C family protein
14.4914 Ahg476898 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
15 Ahg473680 O-fucosyltransferase family protein
15.5563 Ahg496689 cellulose synthase 6
15.9687 Ahg482921 Acyl-CoA N-acyltransferases (NAT) superfamily protein
18.4932 Ahg495914 O-Glycosyl hydrolases family 17 protein
20.0749 Ahg478170 Leucine-rich repeat protein kinase family protein
20.1246 Ahg475021
20.445 Ahg490580 expansin A20
21.6333 Ahg472337
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression