Detail



ID : Ahg473885

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473885|fgenesh2_kg.1__3839__AT1G47380.1
Sequence
TCCTCTCTTT GCGCGTTTTC TCTAATTCTC TCTCTCCTAC GGCTGTTGAA ACCATGGCAT TTCTCCACTT CGCCGGAATT TCGATCGGAA GATGAATCAT CTCCTTCGTC TCTCTTCGCG TAATCTTCCA TCTTCTTCAA TCGCCGCCTA ATTGCAAATC CAAATCGTTT TTTGTATGAT TGGGAGATTT GGTGAAGAAC TAGACACAGC TTAGAGGAAG CTTTTAGTTT TTATAAGCTT AGGGGGAAAC AATGTCAACT AAGGGAGAAC ATCATACAGT TCCACTTTCT GTGTTGCTTA AGCGTGAATC AGCTAATGAA AAGATAGACA ATCCTGAACT TATACACGGA CAGGCTAATC AGAGCAAGAA AGGAGAGGAT TTTACTCTTG TTAAAACTGA GTGTCAACGG GTTATGGGTG ATGGCGTTAC TACCTTCTCG GTTTTTGGGC TTTTTGATGG ACACAATGGT TCTGCAGCAG CTATCTACAC TAAGGAGAAC CTTTTGAACA ATGTGTTAGC TGCAATACCC TCTGATCTTA ACAGAGATGA GTGGGTTGCG GCACTTCCTA GGGCTTTGGT TGCAGGATTT GTGAAAACTG ATAAAGATTT TCAGGAAAGA GCAAGGACGT CTGGAACGAC TGTAACTTTT GTCATAGTAG AAGGTTGGGT GGTGAGTGTT GCATCTGTAG GTGACTCTCG TTGCATACTT GAGCCTGCTG AGGGCGGTGT CTATTATTTG TCTGCTGATC ATCGGCTTGA AATTAACGAA GAAGAGCGAG ATCGAGTCAC TGCAAGTGGT GGTGAAGTTG GTCGGTTAAA TACTGGTGGT GGTACTGAGA TTGGTCCTCT GCGATGTTGG CCTGGTGGTC TTTGTCTCTC AAGATCCATT GGAGATCTGG ATGTTGGCGA ATACATTGTC CCAGTTCCTT ATGTGAAGCA AGTCAAGTTG TCTTCAGCTG GTGGTCGACT GATCATCTCA AGTGATGGTG TGTGGGATGC AATCTCTGCA GAGGAGGCTC TTGATTGTTG CCGGGGTTTG CCACCTGAAT CTTCCGCGGA GCATATTGTT AAAGAAGCTG TGGGTAAAAA AGGTCTTCGC GATGATACAA CCTGTATTGT TGTTGATATA TTGCCACTAG AAAAACCGGC TGCTTCCGTG CCGCCTCCAA AAAAGCAAGG AAAAGGAATG CTAAAGTCCA TGTTCAAAAG AAAAACATCT GACTCCTCTT CTAATATCGA GAAAGAGTAT GCAGAACCTG ATGTAGTTGA AGAACTGTTT GAAGAGGGCT CTGCTATGCT TTCAGAGAGA TTAGATACAA AGTACCCGCT TTGCAATATG TTTAAGTTGT TCATGTGTGC TGTGTGTCAA GTAGAAGTGA AACCTGGAGA AGGAGTGTCG ATCCATGCTG GATCGGATAA TTGCCGTAAG CTTCGTCCCT GGGATGGTCC ATTCCTTTGC GCAAGTTGCC AAGATAAGAA AGACGCAATG GAAGGGAAAA GATCATCGGG AGATAGACAT AGTAGTGAAA GCGACTAGCC ATCAATCTGC AATTTATTGG CAAAGCAACT AACAAAACAG TATTGTGAGT AAATTGGAGC GGTTCAAAGA TCTTCGGGTT GTAATTTTTC ACCCAGAGAG AGATGAAATT CCTTGATCAA CCACCAACAT TCTTACCATT CTCCAGCAGA CTCCAAAGCA GTTTATTTTT TTCTTTCTTA TTCAATGTAA TCCGACATCA AACTTGTTTC AAAGTAGAGG TAATTCATAA GTTCTTTTCA TTTTTTTCTT TTTTTTGTCC ATTTGTGATC ACTCTGTGCT TTGGTATTTA AAAAATGAGT AGAACTAACT ACCAGCAACA GTAGCTTTAT TACTTCTGTT GAAATTGTGG GTCGTTTAGG GAGAGAGGGT AAAGAAGATA TGCAAGTCTG TGTGCAATTA TTTCAATGTA TAAACCGAAG ACAAATTCTT GATAGAAGCA AATCATTTTT CATGT 
Length1995
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22610883.. 22614694
Download Sequence
A.thaliana
AGI-codeAT1G47380.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg494617 Protein of unknown function (DUF3741)
6.48074 Ahg478905 Plant protein of unknown function (DUF641)
10.6771 Ahg903841 IQ-domain 1
10.9545 Ahg948683 phosphate transporter 4;6
12 Ahg488738 Zinc finger C-x8-C-x5-C-x3-H type family protein
13.0384 Ahg482498 poltergeist like 1
17.4929 Ahg480795 Leucine-rich repeat protein kinase family protein
23.2379 Ahg493274 COBRA-like protein-7 precursor
23.3238 Ahg909112 Pentatricopeptide repeat (PPR) superfamily protein
25.2587 Ahg356101 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression