Detail



ID : Ahg488820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488820|fgenesh2_kg.6__1954__AT5G19350.2
Sequence
GCCGACCCGT CGCGTCGTGG GTTTAGGTTA ACGTATTGGC GGCAGTGAAG AAAAGAGACG ATGGCGATGA TGCAGCCGCC GCAGCCGCAA GGCTCCTATC ACCATCCTCA GACCCTGGAA GAAGTTCGAA CTCTTTGGAT TGGTGATTTG CAGTACTGGG TCGACGAAAA TTACCTCACT TCCTGCTTCT CCCAAACCGG CGAGCTTGTT TCTGTCAAGG TAATACGTAA CAAGATCACG GGACAGCCAG AGGGGTATGG TTTTATAGAG TTTATATCTC ATGCAGCAGC CGAGAGAACT CTGCAGACGT ACAATGGGAC ACAGATGCCT GGAACGGAAC TAACTTTTCG GTTAAATTGG GCTTCTTTTG GTTCTGGACA GAAAGTAGAT GCTGGACCTG ATCATTCTAT CTTTGTTGGA GATTTAGCAC CTGATGTTAC AGATTATCTT CTTCAAGAGA CATTCCGTGT TCATTATTCT TCTGTTAGAG GTGCCAAGGT TGTTACTGAT CCAAGTACTG GACGATCAAA GGGTTATGGA TTTGTAAAAT TTGCAGAGGA AAGTGAAAGG AATCGGGCTA TGGCTGAAAT GAATGGTTTG TATTGCTCAA CAAGGCCTAT GCGTATTAGC GCAGCGACGC CTAAAAAAAA CGTTGGTGTA CAGCAACAAT ATGTCACCAA AGGTCCAGTA CCATCTGCAG TTGCTGCACC AGTCCAAGCA TACGTTGCTC AACCTGGACA AGGGCTTCCA CCTGAAAGTG ATGTCACCTG TACAACGATT TCAATTGCCA ATTTGGACCC AAATGTTACA GAGGAAGAGC TGAAGAAAGC ATTCTCCCAA TTAGGAGAGA TTATTTATGT CAAAATACCT GCAACAAAGG GATATGGTTA TGTTCAATTC AAAACCAGGC CTTCTGCCGA AGAAGCCGTT CAGAAAATGC AGGGACAAGT GATTGGTCAA CTAGCAGTTC GCATCTCTTG GAGTAAAAAT CCAGGACAGG ATGGTTGGGT TGCACAAGCA GATCCGAATC AGTGGAATGG GTATTATGGT TATGGGCAAG GCTATGATGC ATATGGTTAT GGGACAACTC AAGACCCATC CTTGTACACA TATGGCGGAT ATGGCTATCC CCAGTATCCA CAGCAGGGAG AGGGTACACA AGACATTTCG AACTCGGCGG CGGGTGGAGT TGCAGGTGCA GAGCAAGAGT TGTATGATCC TCTGGCCACT CCTGATGTAG ACAAGTTAAA TGCTGCTTAC CTTTCGGTTC ATGCAAGTGT TATATTAGGA CGGCAAATGT GGCAGCGTAC CTCAGCACTC ACATCACAAT TGGGAAAATG ATGGCGAAGA GAGGAATAGA ATGGTGGGTG CTTTGAGATG TTTAGTGTGT CCATTTCACT GCTCCTTGTC TGATTGTTTT GCATGTTTCA GATGTTTCTG TAATCTTACA ATTAGGTTCT AGTTACAATG CTAAATCATG AGTCTTCCAA CTTTCCGCCA TGGCCGATGA TAATGCCTTT T 
Length1521
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7802295.. 7804879
Download Sequence
A.thaliana
AGI-codeAT5G19350.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg334100 lactoylglutathione lyase family protein / glyoxalase I family protein
4.47214 Ahg491436 La protein 1
14.5258 Ahg482088 Ribosomal protein S3 family protein
17.2916 Ahg473896 MATE efflux family protein
18 Ahg483090 Transducin/WD40 repeat-like superfamily protein
19.0526 Ahg475028 Cystatin/monellin superfamily protein
19.799 Ahg482864 Transmembrane proteins 14C
22.7156 Ahg493903 prohibitin 3
25.4558 Ahg477224 PENTATRICOPEPTIDE REPEAT 596
26.1534 Ahg480541 ATPase, F0/V0 complex, subunit C protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression