Detail



ID : Ahg491436

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491436|fgenesh2_kg.7__869__AT4G32720.1
Sequence
AGAAAATGGA AACTGTGTCT CTCACTAAAC CCTAGTCCCC TTTCTCAAAT TTTCTTCTCT CTTCCTCCTC CTCGAGCCAG TGAACAATTA TGTCGATTCC TTGTCTAACC GAAGAGACAG CCAAAACTGT TCTTCGCCAG GTGGAGTTCT ACTTCAGTGA TAGTAATCTT CCAATTGATG ATTTCCTCAA GAAGACGGTC ACAGAGAGTG AAGATGGCTT GGTGAGTTTG GCGTTGATTT GCTCCTTCAG TAAGATGAGA GGATATTTGA AGTTGGGCGA TTCTAAAGGA GATGATATTC CTGAAGATAC CATCAAAGCT GTTGCTGATA CTCTTCGAAC CTCTTCTGCT CTCAAGATTT CAGAAGATGG GAAAAAGGTT GGTAGGAGTA CTGAATTGTT GAAGCTGGAA GATTTGATTG AGCAACTTAA TGCTAGAACA GTAGCTGCGT CACCTTTCTC CTATGATGTT AAAAGAGAAG ATGTGGAATC CTTTTTCAGT CAGTATGGAA AGGTTAATAG TGTGAGGATG CCTCGTCATG TTGCAGAGTC AAGGATATTT TCCGGTGTTG CCTTAGTTGA GTTTCCTACA GAAGAGGATG CCCAGAATGT TATGAAGCAA AATTTGGTCT TTGCTGGTCA GGAGTTGGAG CTGAAACCAA AGAAAGAGTT TGATAATGAA AGGGAGAAGG ATGAAGTAAA ATTTGCTAAT TACCAACCTC AAAAGGGATC TGCAAATCAG AAGAATGGTT CTGATCACAA AAACAATTCT GATTATGAGC CAGATTATCC CAAGGGTTTG ATCATTTCAT TCACCTTGAA GCGCTCAGCT GAAGAGGGTA CCACGGAACA AAAAAATTCT GAGGAGACAA CTGATAAAAC AATGGATGAA AGTGAATCAA AGCCAGCAGA TACTCCTGAT GCTGATAAAG AAAACACTGA TGAAGTTCAG GCCCAGGGAG CAGAGGATGA AGATGATGAG AAAGAAGAAA AGGGTGCTCT AGCTACCCAT AAAGATAATA AAGATGTTGT CTTACGCGAA GATCTTAAGG CTGTTTTCGG AAAATTTGGT GATGTCAAGT TTGTGGATTT CAAGATGGGA TCTGAGACGG GTTACCTTAG GTTTGATGAA CCTGAAGCAT CCCAGAAAGC GCGTGCAGCA GCAGTATTAG CCAAAGAAGG TGGACTAGCC GTGAAGAATT TTATCGCTGT CCTAGAACCT GTTACCGGCG AAGCTGAAAA GGAGTATTGG ACTCTCCTTC GCAGCAAAGA TAGGTTTGAC AAGGGTGGCC GTGGAGGAAG GGGAGGAAGA AGAGGAGGGA GATTCGGGCG TAAGAGGGGA TCGGATTCCC CAGGTGGTCG CTGGAACAAA TCTCAGAAAG TGGAAGCATG AGAGCTTTCG CTCGTGACTG CTTCTGTTTT TAATATATTT TCCAGTTGCA ACTTTAATAT TATTCTCTAC TTGTGACTCT TGTGATGTTA TAACTAGAAA TAGCTGCTTA TTTAGCAAAT TTTGGTTTAG TCATATTTGG TTTTGTTTTA TTTGCGCTTT ATGTGCCTTC TTATGCACAT TTCTCTTTCC TTAATTATTT AAAATCGAT 
Length1599
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3436138.. 3438863
Download Sequence
A.thaliana
AGI-codeAT4G32720.1
DescriptionLa protein 1
TAIR curator summaryEncodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.
Alias[AtLa1][La1][La protein 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg496142 nuclear RNA polymerase C1
3 Ahg470349 Prefoldin chaperone subunit family protein
4 Ahg936712 pectin methylesterase 31
4.47214 Ahg488820 RNA-binding (RRM/RBD/RNP motifs) family protein
4.69042 Ahg495261 RNA polymerase Rpb6
5.74456 Ahg313639 nuclear RNA polymerase A2
7.54983 Ahg943928 GTP-binding protein-related
7.87401 Ahg488520
8.12404 Ahg470804 Tetratricopeptide repeat (TPR)-like superfamily protein
8.544 Ahg912893 nucleic acid binding;nucleic acid binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression