Detail



ID : Ahg488835

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488835|fgenesh2_kg.6__1969__AT5G19450.2
Sequence
AAAAAAAAAG AGTCTCTCTT TTGCTCTCAC CACACTCAGA AAGAAGAAGC GAGAAAGAAG GAGACTTTGA CTCTTCTCCT TCTTCTCCTT TCTCTCTGTC ACTTATCCTA ATTTGATCAT CTCTTTCTCC GGTTAAGGTC TCAGGACTTC TCAGATTTGA ATTATATACA TGGGAAATTG TTGTGCTAGC CCCGGTTCTG AAACTGGGAG TAAGAATGGG AAACCAAAGA TCAAAAGTAA CCCGTTTTAC AGCGAGGCAT ACACTACAAA TGGATCTGGA ACTGGCTTCA AGCTCTCTGT TTTGAAAGAT CCAACAGGGC ATGATATATC TCTTATGTAT GATCTGGGGC GTGAGGTTGG TCGCGGAGAG TTTGGTATTA CATACTTGTG CACTGATATC AAAACGGGTG AGAAGTATGC GTGCAAGTCT ATATCAAAGA AGAAGCTTAG AACAGCTGTG GATATAGAGG ATGTTAGGAG GGAAGTTGAG ATAATGAAGC ATATGCCTAA GCACCCGAAT ATCGTGTCGC TCAAGGATGC CTTTGAGGAC GATGATGCAG TGCATATAGT TATGGAGTTG TGTGAAGGGG GTGAGCTGTT TGATCGGATT GTTGCAAGAG GTCATTACAC TGAACGAGCT GCTGCTGCAG TAATGAAAAC TATTCTTGAA GTTGTTCAGA TATGCCATAA GCATGGAGTG ATGCATCGGG ATCTAAAGCC GGAGAACTTT CTCTTTGCAA ATAAAAAAGA GACATCAGCC CTTAAAGCCA TAGACTTTGG ATTATCAGTC TTCTTCAAGC CTGGTGAGGG ATTCAACGAG ATTGTTGGAA GTCCTTATTA CATGGCACCA GAGGTACTGA GGCGAAATTA TGGACCTGAG GTTGATATCT GGAGTGCTGG AGTTATCCTT TATATCCTGC TCTGTGGTGT CCCACCATTT TGGGCCGAGA CTGAGCAAGG GGTGGCTCAG GCGATCATTA GGTCAGTTAT CGACTTTAAG AGGGATCCAT GGCCGAGAGT TTCTGAGACT GCCAAAGACC TTGTAAGGAA GATGCTCGAA CCTGACCCCA AAAAACGGCT TTCTGCTGCA CAAGTACTCG AACATTCTTG GATACAAAAT GCAAAGAAGG CTCCAAATGT TTCACTCGGC GAGACGGTGA AAGCAAGACT CAAACAGTTT TCTGTTATGA ACAAGCTCAA GAAAAGAGCG CTACGGGTGA TAGCCGAACA CTTATCAGTG GAGGAAGTAG CTGGCATTAA GGAAGCATTT GAGATGATGG ACAGTAAAAA GACGGGAAAG ATAAACCTCG AGGAGCTTAA ATTTGGACTT CATAAACTTG GACAGCAGCA GATACCTGAT ACTGATCTAC AGATCCTGAT GGAAGCTGCT GATGTAGATG GGGATGGAAC TTTAAATTAT GGCGAGTTTG TGGCTGTCTC CGTGCATCTT AAGAAAATGG CGAACGACGA ACACTTGCAT AAGGCTTTTA GCTTTTTTGA CCAGAATCTG AGCAATTACA TAGAGATTGA GGAGCTTCGT GAGGCTTTAA ATGATGAGGT AGATACTAGC AGTGAAGAAG TTGTTGCAGC TATCATGCAA GATGTTGACA CAGACAAGGA TGGACGAATA AGCTATGAAG AGTTTGCGGC AATGATGAAA GCTGGAACGG ACTGGAGGAA AGCGTCGAGG CAGTATTCCC GGGAAAGATT CAACAGTTTG AGCCTCAAGT TAATGAGAGA AGGTTCATTG CAATTAGAAG GCGAGAATTG AGAAAGGATC TTGTTTCTGT ATCTCTTAAA GAATTAAAAA GAAAAGAAAA AACAGTATTC TTTGAAAATT GTTATCTTTT TTTTTTTTCC TCAATAATTG TAGATCAGGG TTTCCAAATT TTTTAGTTAC TTGAATAGCC AGCCATGTAC GATATGAAGA TGATGTTCTA AAATTTTCTG ACTCTTTATT TTTCATGTTG TCTGGATCCT TAATATTTGT TGGCAAACAA TA 
Length2002
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7841591.. 7845121
Download Sequence
A.thaliana
AGI-codeAT5G19450.1
Descriptioncalcium-dependent protein kinase 19
TAIR curator summarycalcium-dependent protein kinase (CDPK19) mRNA, complete
Alias[CDPK19][CPK8][calcium-dependent protein kinase 19]
Gene coexpression
MR
MR Locus Description
1 Ahg489422 Tetratricopeptide repeat (TPR)-like superfamily protein
2 Ahg485174 B12D protein
3.31662 Ahg337067 AAA-type ATPase family protein
3.74166 Ahg492943 conserved peptide upstream open reading frame 25
4 Ahg483260 Insulinase (Peptidase family M16) family protein
5.74456 Ahg491431 ENTH/VHS/GAT family protein
6.16441 Ahg477338 bromodomain and extraterminal domain protein 10
6.9282 Ahg471036 ATP-citrate lyase A-3
8.12404 Ahg490318 AAA-type ATPase family protein
8.12404 Ahg921284 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression