Detail



ID : Ahg488949

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488949|fgenesh2_kg.6__2083__AT5G20400.1
Sequence
AACCATGGAA AAGCCAAAGT TCAAGACTGT CCAAGAGGTG GTTGCAGCCG GCGAAGGACT GCCGGAGAGA TATCTCCACG CACCCACCGG AGACGGCGAA GTTCAACCTC TTAACGCTGC GGTGCCGGAG ATGGATATTC CGGCCATCGA TCTCAGTCTT CTCCTCTCTT CTTCTGAAGA CGGTCGAGAA GAGTTGAGTA AACTTCACTC GGCACTCTCT ACATGGGGCG TTGTTCAGGT GATGAATCAT GGAATTACAG AAGCGTTTCT TGACAAAATT TACAAGCTAA CCAAGGAGTT CTTTGCGCTT CCGACCGAAG AGAAACAGAA GTGCGCGAGA GAGATTGGTA GTATCCAAGG ATATGGAAAC GACATGATTC TTTGGGATGA TCAAGTTCTT GATTGGATCG ACCGTTTGTA TATTACTACA TACCCTGAAG ATCAGAGACA ACTTAAGTTC TGGCCTCAAG TCCCACTCGG ATTCAGGGAA ACTTTACATG AATACACAAT GAAGCAACGG ATAGTGATTG AGAAATTCTT TAAAGCCATG GCTAGATCTT TGGAATTGGA AGAGAATAGT TTTCTAGACA TGTATGGGGA AAGTGCTACT ATGGATACAA GACTCAACAT GTATCCTCCA TGTCCGAAGC CGGACAAGGT TATTGGGGTT AAACCGCACG CTGATGGCTC GGCTTTCACT CTTCTCTTAC CCGACAAAGA TGTGGAAGGG CTTCAGTTCC TCAAAGATGG GAAATGGTAT AAAGCTCCTA TAGTCCCTGA TACAATTTTG ATCAATGTTG GTGATCAAAT GGAGATAATG AGCAATGGGA TATACAAGAG CCCGGTTCAT AGAGTGGTGA CTAACAGAGA AAAGGAAAGG ATATCTGTGG CAACGTTTTG CATTCCAGGT GCAGACAAAG AGATTCAGCC TGTGGATGAG CTTGTGTCTG AGGCAAGACC AAGATTGTAT AAAACAGTTA AGAAGTATGT GGAGCTCTAC TTCAAGTACT ATCAACAGGG TCGACGACCT ATTGAAGCTG CATTGATCTG ATTGAATCTG TTTCTTTAGT TGCTTGAATG TGAGGCTGCA TTGTGTTG 
Length1098
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8234635.. 8236026
Download Sequence
A.thaliana
AGI-codeAT5G20400.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.
Alias
Gene coexpression
MR
MR Locus Description
18.7617 Ahg481427 ATP-dependent protease La (LON) domain protein
22.5389 Ahg946406 myo-inositol polyphosphate 5-phosphatase 2
24.9399 Ahg948815 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
27.7489 Ahg470845 Surfeit locus protein 5 subunit 22 of Mediator complex
43.0813 Ahg477715 Signal transduction histidine kinase, hybrid-type, ethylene sensor
43.7836 Ahg941307 disease resistance protein (TIR-NBS-LRR class)
57.7581 Ahg890654 Disease resistance protein (CC-NBS-LRR class) family
64.7379 Ahg887884 glutamate receptor 2.7
66.5733 Ahg322706 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
67.3424 Ahg479059 lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression