| Annotation |
|---|
| Description | jgi|Araly1|941307|scaffold_601851.1 |
| Sequence |
GCTTAGAGAT TTTCCTTCTG GATGATACTT TCAGTGCGTC GTTTATGCTT AAGCAAGAAT GAAAAGATCA GCCGCCTTCC AGATCTCATC AATAAATTTT CTCAACTGCA ATGGCTTGAT TTGAAGTATT GTAAGAATCT TACACATGTT CCTCAGCTTC CACCAAATCT TCAGTGTTTA AACGTACATG GTTGTTGCTC ACTGAAGACA GTTGCAAAAC CACTGGTATG TTCTATACCG ATGAAGCATA TCAGTTCCAC GTTCATTTTT ACTAACTGCA ATGAATTGGA ACAAGCTGCA AAGGAGGAAA TTGTAGCATA TAGTTCTGTT CCTGAGATTT TGTTCTGCAC TAGCTTTCCG GGATGTGAAA TGCCTTCATG GTTTTCTCAC GACGCAATTG GATCTATGGT GGAGTTCGAA TTACCTCCTC ACTGGAATCA CAATAGGCTT TCTGGGATAG CTCTTTGTGT TGTTGTCTCA TTCCAAAACT GTCAAAATCA TGCCAACTTG ACAGTCAAGT TCTCTTGTGA GCCAAAAAAT GGAGAGAGCT CTTGCACCAG CATTACTTGG AAGGTTGGAA GTTTGATTGA ACAAGACAAC CAAGAAGAAA CAGTTGAGTC AGATCATGTC TTTATTGGCT ACACCAACTG CTTAGATTTC ATAAAGATTG TTGAAGGCCA AGGTCCTCGT AAATGTGCTC CGACCAAGGC ATCACTGGAG TTTAGTGTGA CAACTGGTAC TGGCGGGGAA GCTAGGTTTG AAGTTTTGAA ATCCGGTTTC AGTTTTGTGT TTGAACCTGA AGAGAACAGA GTTCCATTCC CAAGGAATGA TGAAGTCAAA GGTAAAACAA AAAATAACGC TAATGGTTGT TTCAAGGATC AAGCAAAAGG TGATGAATAT CCCAAGGGCC AGTGGCAGAC CTACATTGAA AGTTCTGGCA ACTAACATCC CAGGTGAAGT ATTTC |
| Length | 965 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7079798.. 7080898 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G17880.1 |
| Description | disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae. |
| Alias | [CSA1][constitutive shade-avoidance1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.2354 |
Ahg336756 | |
| 20.5426 |
Ahg930201 | |
| 20.9762 |
Ahg484044 | ABC-2 type transporter family protein |
| 24.6171 |
Ahg325028 | KDO transferase A |
| 26.5518 |
Ahg320852 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
| 34.4964 |
Ahg917356 | oxidative stress 3 |
| 38.5227 |
Ahg902342 | Radical SAM superfamily protein |
| 39.9375 |
Ahg492857 | VACUOLAR SORTING RECEPTOR 7 |
| 42.5206 |
Ahg473694 | Protein kinase family protein with leucine-rich repeat domain |
| 43.7836 |
Ahg488949 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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