Detail



ID : Ahg489138

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489138|fgenesh2_kg.6__2272__AT5G22850.1
Sequence
ACACTGGAAC ATTTTCTGTT TATCCGCTGT TATACTTCTC TCTCTCTCTA TATCCCAAAA GACGACACAA GTACAAAACA AATCTGCAAA TCTTCTTCTT CTGTCTTAAT GAATTTCAAG ACTACCGATT CGTAGCCGTT AACAATTTGA CGGCTCAATT CTCCAGAAGA AAAAAAAATG ATCTTTTTGA TTTTTGACGA GATTAAGAGA TCTTGTTAAC ACTTCAAAGC ATACCCAACT CGGGAAGCTA TGGTGGCTAT TCGTTTCGCG GCGGCGATTC TGATTTATTG TTTAGTACCG GCGGCGGTTT TATCTTACGG TTTCCCGGCG GCGCTGAAAC TTGAAAGAGT GATTCCGGCG AATCACGAGA TGGAACTTAG TCAGCTCAAG GCTCGTGATG AAGCTAGACA CGGCAGATTG TTACAGTCTT TAGGCGGAGT CATAGATTTT CCCGTCGATG GAACTTTTGA TCCTTTCGTT GTTGGATTAT ACTACACGAA AATACGATTA GGATCTCCTC CAAGAGATTT TTATGTACAG GTTGATACAG GAAGTGATGT TTTGTGGGCT AGTTGTGCTT CTTGTAATGG CTGCCCTCAA ACCAGTGGAC TCCAAATTCA GTTGAATTTC TTTGATCCAG GGAGTTCTGT AACAGCAACA CCGGTCTCAT GTTCTGATCA AAGATGCAGT TGGGGTATTC AGTCCTCTGC TTCTGGCTGT TCTGTTCAGA ACAACCTTTG TGCTTATACG TTTCAGTATG GGGATGGAAG TGGCACCTCA GGGTTTTACG TCTCGGATGT CTTGCAATTT GACATGATTG TTGGAAGCTC TTTGGTCCCA AACTCAACGG CTCCGGTTGT GTTTGGTTGC AGCACCTCGC AGACGGGAGA TTTAGTGAAG TCTGATAGAG CGGTTGATGG AATCTTCGGG TTTGGCCAGC AAGGAATGTC TGTGATTTCT CAGCTTGCTT CACAGGGATT AGCTCCAAGA GTGTTCTCTC ACTGCTTGAA AGGAGAGAAT GGAGGCGGAG GCATACTGGT TCTTGGAGAG ATTGTGGAGC CAAACATGGT CTTTACTCCT CTTGTCCCCT CGCAGCCTCA TTACAATGTG AATCTTCTGA GCATCTCAGT GAATGGCCAA GCTTTACCTA TCAATCCATC GGTCTTCTCT ACATCAAACG GTCAGGGAAC AATCATTGAC ACTGGTACAA CATTGGCATA CCTTTCTGAA GCAGCCTATG TTCCTTTCGT TGAAGCTATT ACAAATGCTG TTTCGCAGTC TGTCAGGCCC GTTGTTTCGA AAGGGAACCA ATGTTACGTA ATAGCCACAA GTGTCGCAGA CATATTTCCT CCAGTTAGCT TGAACTTTGC TGGTGGAGCA TCCATGTTCT TGAATCCTCA GGATTACCTT ATACAGCAGA ACAATGTCGG AGGTACTGCA GTGTGGTGCA TCGGTTTTCA AAGGATACAG AATCAAGGGA TAACAATCCT TGGAGATTTG GTTCTTAAAG ACAAGATCTT TGTCTATGAT CTGGTCGGTC AGAGAATCGG ATGGGCAAAC TACGACTGTT CAATGTCGGT AAATGTCTCA GCGACTAGCA GCAGCGGAAG AAGCGAATAT GTGAACGCAG GACAGTTTAG TGACAATTCT GCTGCACCGC AGAAGTTATC TTTGGACATT GTTGGAAACA CTCTAATGTT GTTACTAATG GTAATCAACA TGTTCTTATA GCACGTACAG CTTTTGCAAC GTTGCCTAAA ATTGTAGTTT CTTCTATACC CCTTTTGATG TGGTCGTCGG CGTGTTATTT GTGGTCACCG GAGAGTAAGT TTCTCCCAAC CGGCGAAGCC CAGCAGAAGA AAAGTTAACG TTTGTTGTTT GTTTTTTTTT TTACCATTTC ATTGTTATAG TTTTGGATGT ACTGTACATA ATTCCTTTTA TACATAATGG TGTCT 
Length1955
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9131572.. 9134592
Download Sequence
A.thaliana
AGI-codeAT5G22850.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg934676 PATATIN-like protein 6
55.7315 Ahg938139
62.8729 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
65.1076 Ahg895406 protein kinase family protein
66.5207 Ahg897508 type one serine/threonine protein phosphatase 5
67.7495 Ahg923354 Fatty acid hydroxylase superfamily
72.0833 Ahg932726 embryo defective 2410
74.7329 Ahg481650 dephospho-CoA kinase family
87.7269 Ahg477950 HCO3- transporter family
92.2605 Ahg492932 GDA1/CD39 nucleoside phosphatase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression