| Annotation |
|---|
| Description | jgi|Araly1|485847|fgenesh2_kg.5__1839__AT3G54460.1 |
| Sequence |
ATTTTCTTTT TCTTTCGCAG AGGTCGAAAC AGAAAGATGC GATTTTTTTA GAGAAAATCT ATAAAGCCTT ATACTTTCTG CATTCCGTGG TCGAGGGCCG ATGATGATCA CAAACTCTGT GGTTTTCTCT GTACCGTTCT TTCCGTCGAT TCGCCTGGTC TTCTTCAATT GGGCTCTTCC TGTTTCATCT TCAATGATGG TTTCAAATCC GACAATGGCT TGATCTTATC CCTCATCAAT CCCATCTCTA ATCTCAAATC CCTAATTTCG TCTGAAGGAG ATCAGAATTG TGGTGAAGAC GGTGGATTGC AGACTCCACA GAAACGCCGT AAGTGCGTTG AGGGAGAGAG TAGTCGTACA CGAAAGTCTC CGAAGTCGAA GAGCCGAGTT TTATCCGGGA GCAAGGAGAA GACCGTACAG GGGAGGAAGA GGGTAAAGAG TATAGGCATG GTGAATGGAA GCATAAGTGT AGTGCAGCAG CTTCACGCTT TGGTTGCCAA CAAATGTTTG AAGATATTTT CTCAAGTGGT GAAGATTGAT AAAGGTGAGA ATGGAGAAGA AAGAGCTGTG GTGCTAGTTG ATGTTTACTT ACCTATTGCA TTGTGGTCCG GGTGGCAATT TCCCAAATCC CAAGCTACTG CTGCTGCATT GTTCAAGCAC TTGAGCTGTG ACTGGGGACT GAGAGTCTCA ATCCTTGACG GGGAAAGTGT TTGGGAAGAG GCCAATGGAA GAATAAAGGC CATCTGGGAT CTATCCGACT GTCATGTGTT TAATTGCAAA TTACTCTGTA ATGCCCCAGA TTCTCCAAAA AGACGATTGT TCAAACTACA TGAAATCTTT AAGAGCTTGC CCAGTCCAGG AAATCATGAT GTGTCTTGTT CTTCTAGAGT ATTACCGTCT ACTGACTCTT GTGCATCTGG TGTATGGGAT CTCTCAGATG ACGTTTTGAT TAGCATACTG ATGAAACTTG ACACGAAGGA TCTTTTTAGC ATTTCAGCAG TCTGCCGTCT CTTCAGATCA TTGACCTCTC TAATTGTGCC ATGTATGAAT CTAAAACTCT TTCCTCATCA GCAGGCAGCA GTTGGTTGGA TGCTGGAGCG TGAGAGGAAA GCTGAAGTTT CCTCGCATCC CCTTTACTTG AGTTTTGATA CTGAGGATGG GTTTAGTTTC TATGTAAATG CTGTGACTGG TGATATAATC ACTGAGGCAG CTCCCATGGT CAAGGATTTT CGTGGGGGAA TGTTCTGCGA TGAACCAGGT CTCGGAAAGA CGATAACAGC ATTATCCCTT ATCCTAAAGA CGCAGGGAAC AATGGCTGAT CCGCCTGAGG GACTTCCTAT CGTTTGGTGT ACACATAAAA GTGACAAAAA ATGCGCCTAT TATGAGTACA CGAGTGACCA GTTCACTTCT AACAGCATGT TTGCTGTAAA GAGGTTTCAA AGTCCAAGTA GCTGTCGAAA CCAGTTTTCT TTTGAAGCCT TTCGTCCGCT GCTGGAGTCG AAATCGTTGC CACTTAAGCA AGCTAGGCTG ATGGATCCAG ATGATCAAAC ATTGGAGTCT AAGAACTCAA ACTTTGAAAA CGAATTTGAA ACCCACATCC CTGCGTCCCT GGATGTAAAA GCTCAATGTA GAAAGCCCTT GGGTAATGTC AGGAAAAATC TCTTGCATGT ATATGATGGC GCATCTGAGC TCTCCAAAGT GATGGAAGCT AAAAGAATCG GTAATTGGAA GAAATGTGGT ATGATAACAG GTTGCAAGAG AAAGGGTCTT ACTGATTCGG ATGTGGAAAG CGATATTTGG ATACAGTGTG ATTCTTGCTC AAAGTGGCGG AGAATAATAG ATGAAGGTGT ATCTGTTACT GGTTCTGCAT GGTTTTGTAG CAACAATGCT GACCCTGCAT ATCAGAGTTG TAATGATCCT GAAGAATTAT GGGATAGATC TCAACCTATA AAATTCTTGC AAGGGTTTTA TACTAAGGGA GCCTCTGGTG AAGAAAATGA TAATATCTCT TTCTTCACCA GTGTCCTTCG GGAACACAAG TCTTCAGTAA ACTCAACCGT AAAGAAAGCC TTAATTTGGC TTGCTAAACT CCCTCTTGAG AAACTCTCAC AGATGGAAAC AGTTGGCTTA CCTGGTCCAG TGTTGGGTTT GAATAAAGAT GCCCTTGGGT TCCAGACAAT ATTTCGAGCA TTTGGTCTTA AGAGTAGAGT TGAAAAGGGT GTCACCAAAT GGTTTTACCC GAAGTTTCTT GAGAACTTAG TATTTGATGT ACCTGCCCTC AAAGTTGCTC TCTGTCAGCC GCTGGATACA TTTAGACTGT ATTTGTCAAA AGCAACTCTA ATCGTCGTCC CCACAAATTT AGTTAATCAT TGGACAACAC AAATCCAAAA ACATGTTTGC TCTGATCAGC TTCGCCTTCT TGTTTGGACT GACCATATAG AGCTTTCTCC ACACAGCTTG GCTTGGGATT ATGATGTTGT GATCACAACT TTTAGTCGCT TAAGTGCGGA ATGGAATCCC CGGAAGAAAA GCCCATTGAT CCAAGTGCAT TGGCTTAGGG TCATGCTAGA TGAAGGACAC ACTCTTGGTT CTAGTGTCAG TTTGACTAAT AAATTTCAGA TGGCTGTTTC TTTGACAGCT TGTAATCGTT GGCTATTGAC AGGAACACCA ACCCCTAACA CACCAAATAG CCAGCTTTCA CATATCCAAC CTCTTTTAAA GTTTCTTCAC GAGAAAGTAT ATGGAGAAAA TCCAAAGTTT TGGGAAGCTG GCATCCTTAG ACCATTTGAA GCAGAAATGG AGGAGGGTCG TTTGCGTTTA CTTCAGCTGC TTCAGAGATG CATGATAAGC TCTAGAAAGA AAGATCTGAA GATGATTCCT CCGTGTATCA AGAAGTTGAC ATACCTTAAT TTCCTTCCAG GTCATGCAAG AAGCTACAAT GAACTAGTGG AGACAGTTAG GCGTAATATC TTATTAGCTG ATTGGAATGA TCCGTCTCAT GTAGAAAGTC TGCTTAACTC TAAACAGTGG AAATTTCGAA GCATTACCAT CAGTAATGTC AGACTATCTT GCTGTGTGGC TGGGCATATT AAAATGACTG ACGCTGGTCA TGATATCAAA GAGACAATGG ATGCTTTACT TGAAAATGGT CTGGATCTTT CGACAGAGGA GTATTCTTTT ATTCAAGATA GCCTTATTGG TGGCTGTAAC TGTAAAAGAT GTGGGGAATG GTGCCGACTT CCTGTTATCA CTCCATGTAG ACACCTGCTG TGCCTTGATT GTGTTGCTCT TGATAGCGAA AGGTGTACTA TTCCTGGTTG TGGATATTTA TATGAGATGC AAAGTCCTGA AACGTTGGCT CGACCAGAAA ATCCAAATCC AAAGTGGCCT GTGCCAAAGG ATCTTATTGA GTTACAGCCT TCATATAAAC AGGACGACTG GAATCCTGAC TGGCAATCTA CGTCCAGCAG TAAAGTCAGT TATCTCGTAG ACAGGCTGAG GAAGTTACAT GAGGGTAATA GAAAAAGCAT TTTGTCTTTC AACAAGACTG ACAATGACAA CCTGGAAGAC AATCCCGCTG GTACCTCAGG AACCTTTTTG GGGAAAGAAT CCCATGGACA GGATTGTGGA TCTCAGATGG TATTTGTTGA TAAAGTATTG ATTTTCTCTC AATTTCTTGA GCATATTCAC GTGATTGAAC AACAGTTGAC AACTGCTGGC ATCAAGTTTG GTAAAATGTA CAGTCCAATG CATTCATGTA ATAAGATGAA ATCTCTGGCA ATGTTCCAGA ACGATGCTGA TTGCATGGCA CTTTTGATGG ATGGAAGTGC GGCCCTTGGT CTTGATTTGA GCTTTGTAAC ACATGTTTTC CTGATGGAAC CAATCTGGGA TAAAAGCTTG GAAGAGCAAG TCATCAGTCG TGCTCATCGG ATGGGCGCAA AGCGCCCTAT TTTTGTAGAA ACCTTAACCA TGTGTGGCAC GATTGAAGAA CAAATGATGA GATTCCTAGA GGATGCAGAA AAGAGTGATA GATTATTCAG TGGAGATTAC ATAGAAGTGA AGCAGGAGAC AACACGGTGC CGCCGAACGC TACATGATTT GGCAGAAAGC AATTACCTGT CTCGTCTTAG CTTTGTCCGA TGCGATGGCA AAATGGAATT TGCAGCTTCG CAGCTTGCAG GTTTAAAAGG TCACCAATTA GCTTAAGAAA AGTAGGTTTT TTTTTGTAAT CACAACAAAT AATTGTTACA CATTTTTAAG TTTGGATATA AACTAGGATA AATATAAGGC CGATCATTGC AAA |
| Length | 4303 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16087112.. 16092741 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54460.1 |
| Description | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg338905 | DNA LIGASE 6 |
| 2.82843 |
Ahg347545 | |
| 3.60555 |
Ahg491051 | early-responsive to dehydration stress protein (ERD4) |
| 4.24264 |
Ahg943440 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 5.38516 |
Ahg933948 | switch subunit 3 |
| 5.38516 |
Ahg311407 | Beige/BEACH domain ;WD domain, G-beta repeat protein |
| 5.74456 |
Ahg495012 | SIN-like family protein |
| 5.91608 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 8.66025 |
Ahg478973 | ubiquitin-conjugating enzyme 25 |
| 10.0995 |
Ahg931109 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|