Detail



ID : Ahg489150

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489150|fgenesh2_kg.6__2284__AT5G22950.1
Sequence
TCGCAACAAT GGAGAGAGTG ATGAACATCA TAAAGCCAAA GCCTGATCCC AAACAACTCT TGCGTGATTG GCAACGCAAA TTACGTCAGG AGTGTCGTAA CATCGAACGC CAAATCCGAG ATATACAGAA AGAAGAAAGA AATGTACAAA AAGCTATTAA AGAAGCTGCA AAGAGGAATG ATATGGTCTC TGCTAAGGCA CTTGCTAAGG AAATTGTGAG TTCTAGAAGA ACAGTGAACC GGTTATATGA AAATAAGGCG CAGATGAATT CGATATCAAT GCACCTTGGG GAGAGTGTTG CGATTGCTCG AACAGTTGGG CATTTGTCGA AGAGTGCGGA GGTTATGAAG CTTGTTAATA ATCTCATGAA GGCTCCACAA ATGGCTGCAA CAATGCAGGA ATTTAGCAAA GAGATGACTA AGGCCGGAGT TATTGAGGAG TTTGTGAATG AGGCCATTGA CAATGCTCTA GATTCAGAGG ATATGGAAGA AGAGATCGAT GAAGAGGTTG ATAAAGTATT GACAGCAATT GCTGGAGAAA CCGCTGCAGA GCTCCCAGAA GCTGTTAGAA AGGAAAGGAT AAAGGTACCT GCACAGAAGG CGAGCACTTC TCGTGAGGAA GAGGCAATTG CAGAGGGTGT TGATGATGAG GAAGAATTGG AGGAAATTCG AGCTCGGCTC GCTAAAGTTA GATCCTAACT TTTAAACGCT ATTCTTGATT GATATGATCA ACTTTTGATG AGAACAGAAG GCGATCGCAG TGTATTGTAT AATATAAATG AAAATACCAT GCTTCGAAAT ACATGTAAAC ATTATTGTTA ACGAAGTTTT TT 
Length832
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9202511.. 9204106
Download Sequence
A.thaliana
AGI-codeAT5G22950.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS24.1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg353186 ARM repeat superfamily protein
21.2368 Ahg475008 heavy metal atpase 5
36.606 Ahg480076
37.8418 Ahg896721 5'-3' exonuclease family protein
40.2989 Ahg490530
46.4327 Ahg491551 Protein phosphatase 2C family protein
50.1996 Ahg478494 Tetratricopeptide repeat (TPR)-like superfamily protein
52.2494 Ahg487253 F1F0-ATPase inhibitor protein, putative
52.8204 Ahg495970
54.1202 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression