| Annotation |
|---|
| Description | jgi|Araly1|896721|Al_scaffold_0005_687 |
| Sequence |
ATGGGAGTGC AAGGTCTTTG GGAGCTTCTT GCTCCTGTAG GTCGTCGCGT CTCCGTCGAA ACCCTAGCCA ACAAACGATT AGCCATCGAT GCGAGTATAT GGATGGTACA ATTTATCAAA GCGATGCGTG ACGAGAAAGG AGATATGGTT CAGAACGCAC ACTTGATCGG ATTTTTCCGA AGGATTTGTA AGCTTTTGTT CTTAAGGACT AAACCGATCT TCGTCTTTGA TGGAGCTACT CCGGCATTGA AACGTCGTAC TGTTATTGCT CGTCGTCGTC AACGTGAGAA TGCTCAGACT AAAATCCGAA AAACCGCTGA GAAATTGCTG CTTAATCGGC TTAAGGATAT TAGGCTTAAG GAACAAGCTA AAGATATTAA GAATCAAAGA TTGAAGCAGG ATGATAGTGA TAGAGTGAAG AAACGTGTAT CTTCTGATTC TGTGGAAGAT AATTTGCGAG TTCCTGAGGA GGAGAAGCTA GATGAAGTAT CTCCAGCATC TTTGGTGGGA GGGGAGAATG GTGTTGATGA TGTCGTCAAA GAGCTCACGA AGGATGATCC CAAGGGAAAG GGAGTTTTGT TGGATGGGGA TGACCTAGAT AACAAAATGA AGAGTAATCT TGAACAGGAT TCCTCAGTAC AGGGGAAGGA TTATCAGGAA AAGTTGGATG AGATGTTGGC GGCATCCCTT GCAGCTGAAG AAGAAGGAAA CTTTACTAGC AAAGCATCAA CTTCAGCTGC AGCAATCCCG TCTGAGGAAG AGGATGAGGA AGAGGACAGC GACGAAGATG AGGAAATTTT ATTGCCAGTA ATGGATGGGA ATATCGACCC AGCTGTTTTG GCTTCTCTCC CTCCATCCAT GCAACTTGAT CTCCTTGTTC AGATGAGAGA AAAATTGATG GCAGAAAACC GGCAAAAGTA CCAAAAGGTC AAGAAGGCCC CTGAGAAGTT TTCTGAATTG CAAATAGAAG CATATCTTAA AACTGTAGCC TTCCGTCGGG AAATAAATGA AGTTCAGAGA TCTGCTGGTG GAAGGGCTGT TGGTGGAGTT CAAACTTCTA GGATAGCTTC GGAAGCAAAC AGAGAATTTA TATTCTCGTC TTCTTTTGCT GGTGATAAAG AAGAACTGGC GTCCGCCAGA GAAGGAAGAA ATGATGAAAA TCAAAAGAAA ACGTCACAAC AGTCTTTGCC AGTCCCCGTC AAGAATGCTT CCTCGGTGAA AAAATCAGAT GCTACCATTG AGTTGGATAG AGATGAACCT AAAAATCCTG ATGAAAATAT TGAAGTATAT ATAGATGAAA GGGGGCGTTT TAGAATAAGG AACAGACACA TGGGAATCCA AATGACACGT GATATCCAGA GGAACTTACA TTTGATGAAA GAAAAGGAGA GAACAGCTTC TGGTTCTATG GCTAACAATG ATGAAACATT CAGCGCCTGG GAGAACTTTC CTACTGAGGA CCAGTTTCTT GAAAAATCAC CTGTTGAGGA AGATGTTGTG AACCTGGAGA TCCAGAATGA TGATTCCATG CTGCAAAATC CATCTTCAAT AGAGATATCA TTTGACCATG ATGGTGGTGG AAAAGATCTC AATGATGAAG ATGATATGTT TCTTCAATTG GCAGCGGGAG GACCAGTGAC AATCAGTTCT ACAGAAAATG ATCCTAAAGA AGACTCTTCA CCGTGGGCTT CTGACAGTGA TTGGGAAGAA GTGCCTGTTG AACAGAATAC TTCTCTCTCT AAGCTTGAAG CGAATTTAAG CAATCAGCAT ATCCCCAAGG ATATTAGTAT CGATGAGGGT GTAGCATGGG AAGAATATAG TTGTGAAAAT GCCAATAGCT CCATGGAGAA TGATACAGTA ACAAAGATCA CAAAAGGCTA TCTGGAAGAA GAAGCTGATC TGCAGGAGGC TATCAAGAAA AGTCTTCTTG AATTACACGA TAAGGAATCT GGGGATGTCC TTGAAGAAAA TCAATCAGTA AGGGTAAATC TTGTTGTTGA CAAGCCAAGC GAAGATAGTC TTTGTTCTAG GGAAACCGTT GGTGAAGCTG AGGAAGAGGG ATTTCTGGAC GAAATAACAA TCTTGAAAAC CAGTGGTGCT ATAAGTGAAC AGTCCAACAC GTCTGTAGCG GGCAATGCAG ATGGTCAGAA AGGGATAACC AAACAATTTG GTACACACCC TTCTTCCGGT TCTAATAACG TTAGCCGTGC TGTGAGCAAT GAATTGTCAA AGGTAAAATC AGTTATCTCA CCTGAGAAAG CATTAAATGT TGCTAGTCAA AGCTGCATGC TATCCACCAT GGCTAAACAG CACAATGAAG AAGGTTCTGA AAGTTTTGGT GGAGAATCTG TCAAAGTATC TGCTACGCCC ATAGCTGATG AGGAAAGAAC TGGTTTTCTT GGTGAAAAAG GTAATGCTGA TGGTGAATCA TCTATCATGA TGTATAAGAG AGATTATAGT AGACGTAAAA TCCAGAGTCT TGTCACTGAA TCAAGGGACC CTTCTCTTGA TGTCGTCAGA TCGCAAATAG GGATACTACA TGACACAGAT TCACAAAATG AAAGAAGGGA GGAAAATAAC TCTAACGAGC ACACTTTCAA TATTGACAGT TCAACAGATT TTGAAGAGAA AAGCGTGCCT GTTGAATTTT CAGAAGCAAA TATTGAGGAG GAAATTCGAG TTCTCGACCA AGAATTCGTA AGTTTAGGTG ATGAACAGAG AAAACTTGAG CGGAATGCTG AATCTGTGAG CAGTGAGATG TTTGCAGAAT GCCAGGAGCT ACTCCAAATT TTTGGCATAC CGTACATCAT AGCTCCCATG GAAGCAGAGG CACAATGTGC GTTTATGGAA CAATCAAACC TTGTTGATGG CATTGTCACT GACGATTCTG ATGTATTCTT GTTTGGAGCA AGGAGCGTGT ACAAAAATAT ATTTGATGAT CGCAAATATG TGGAGACATA CTTTATGAAG GACATTGAAA AGGAGCTAGG CTTGAGCAGA GATAAAATAA TCCGCATGGC AATGCTTCTA GGAAGCGATT ACACAGAAGG AATCAGTGGT ATTGGTATTG TCAATGCTAT TGAAGTTGTG ACTGCATTTC CCGAAGAGGA TGGGCTTCAG AAATTTCGTG AGTGGGTTGA ATCACCTGAT CCAACCATTT TAGGTTTGAA GATAAAGAAG CGGGGGTCTG GCTCTGTAGA TAATAAAGGA ATCATCTCAG GTGCCTCGAC TGATGACACT GAAGAAATAA AGCAAATCTT CATGGATCAG CATAGAAAGG TAAGCAAGAA CTGGCATATT CCATCGACTT TCCCTAGTGA GGCTGTTATT TCAGCCTACT TAAATCCACA AGTGGATCGG TCGACTGAGA AATTCTCATG GGGCAAGCCT GATCTATCAG TTCTTAGAAA GCTATGCTGG GAAAAGTTTA ATTGGAACAG CAAGAAAACA GATGATCTAC TACTACCAGT CTTGAAGGAG TATGAAAAGC GAGAGACGCA ACTTCGGATG GAAGCTTTCT ATTCCTTTAA TGAAAGATTT GCAAAGATCC GTAGTAAAAG AATCAACAAA GCTGTCAAAG GAATTGGCGG AGGTCTATCG TCAGAAGTGG CTGATAGTAC TCTCCAGGAA GGTCCAAGAA AACGAAATAA GAAAAGAGTT GCTCCTCATG AAACTGAAGA TAACACCACT TCTGACAAAG ATTCACCTAA AGCCAATGAG AAAGTGAAAA ACAAAAGGAA GCGCTTAGAA AAACCATCTA GTAGTAGAGG CAGAGGCAGA GCCCAGGAAA GAGGAAGAGG AAGAGTCCAA AAGGATCTCC TTGAGCTATC AGACGACACT TCTGATGATG ATGACAAGGA TTTAGAGGCA AAACCGAGCA ATCTTCAAAA GTCAACACGA TCTCGGAATC CTGTGAAGTA CAATGCAAAA GAAGACGATG AAATGGACGA GTCAAGAAGC AATGGAGAAT CCCTTAGTGA GCATTTCGAA GAGGTTGATG AAGGCAGAAT AGGAAATGTC TCTGAAGAAA GAACACAGAA AGAAGCATCA ATCAATGATT GTCCATCTGA AGACTATATT CAAACGGGAG GTGGGTTCTG TGCAGATGAA GCTGATGAGA TTGGAGATGC TCATCTGAAA GATAAAGCTA CGGATGATTA CAGAGTGATT GGTGGCGGAT TCTGTGTTGA TGAGGATGAA ACAGCTGAGG AAAACACAAC GGATGATGCA GAGATACTAA AGATGGGGAG TGAAGAACGA CGAAAGAAAG GTAAACGTCG AAATGAAGAA GATGCATCAT TGGAAGAGAA TGTTGAGATT GATTTTGGGA ATTCTTCAAC TGGAGGATTA AGTGCTATGC CTTTCTTGAA GAGAAAAAAG AGAAAAAACT GA |
| Length | 4392 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 4029816.. 4036742 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G28030.1 |
| Description | 5'-3' exonuclease family protein |
| TAIR curator summary | Required for repair of pyrimidine-pyrimidinone (6-4) dimers. |
| Alias | [UVH3][UVR1][ULTRAVIOLET HYPERSENSITIVE 3][UV REPAIR DEFECTIVE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.83176 |
Ahg927120 | Protein of unknown function (DUF300) |
| 10.6301 |
Ahg483462 | Plant regulator RWP-RK family protein |
| 17.7482 |
Ahg473837 | |
| 19.6723 |
Ahg945006 | pathogenesis related homeodomain protein A |
| 33.1059 |
Ahg490342 | sucrose synthase 3 |
| 34.5543 |
Ahg481908 | alternative NAD(P)H dehydrogenase 2 |
| 35.3695 |
Ahg493908 | Domain of unknown function (DUF23) |
| 37.8418 |
Ahg489150 | SNF7 family protein |
| 38.2623 |
Ahg477464 | Regulator of chromosome condensation (RCC1) family protein |
| 39.5221 |
Ahg488264 | bromodomain and extraterminal domain protein 9 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|