Detail



ID : Ahg489157

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489157|fgenesh2_kg.6__2291__AT5G23040.1
Sequence
ACGACTCGCT TATCTTTTCC TTCGACGGAG GAACCATGTC CTCGTCTCTT CTTCTCTCCG GTTCTGCTGT ATCTTCTTCG TTTATCGCTC CATCGAAGCT TTCTTTGGTA CGAAATTCCA ATAAGACATC ACTGTTACCA TTTCGGAATG TTTCAAGAAG CTTCAAAAGC GTTAGGTGCT CCGTTGATTC TTCATATGGA GGTAACGTCC CCACGTTCCC TCGGACCAGA GTTTGGGACC CGTACAAACG TCTAGGAGTT AGTCCATATG CTTCCGAGGA AGAAATCTGG GCCTCTCGTA ACTTTCTCTT ACAGCAGTAT GCTGGACATG AGAGAAGCGA AGAATCAATA GAAGGCGCCT TTGAGAAGCT TCTGATGTCT AGTTTTATCA GAAGGAAGAA GTCTAAAATC AATCTTAAAA CAAGGTTGAA GAAGAAAGTT GAGGAATCTC CTCCCTGGCT CAAAGCTCTT CTCGATTTTG TTGAAATGCC TCCCAAGGAC ACTATATTCA GAAGACTCTT CCTCTTTGCC TTCATGGGTG GTTGGAGTAT CATGAACTCA GCAGAAGGCG GTCCTGCCTT TCAGGTGGCG GTATCGTTGG CTGCGTGCGT ATATTTCCTG AATGAGAAGA CAAAGAGCTT GGGGAGAGCT TGCCTAATCG GAATTGGAGC TTTAGCTGCC GGGTGGTTCT GCGGTTCGAT AATCATTCCC ATGATTCCAA CGTTTCTCAT TCAGCCGACA TGGACACTCG AGCTCCTAAC ATCATTGGTT GCTTATGTGT TTTTGTTTCT TTCTTGTACT TTCCTCAAGT AAGTTGCGGT TTTATCCAAA CGCTTTTTTG TTCTTTTGCC CAAACATTTA CAGAACCTTT CGGAAAAATT AGTGAAAGTT GTTAAGTGTT TGATTGGTTT CACAGTTTTC TTTT 
Length924
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9301321.. 9303053
Download Sequence
A.thaliana
AGI-codeAT5G23040.1
DescriptionProtein of unknown function (DUF3353)
TAIR curator summaryCell growth defect factor 1.Causes Bax mediated lethality in yeast by generating reactive oxygen species and this effect is suppressed by AtBI-1.
Alias[CDF1][CELL GROWTH DEFECT FACTOR 1]
Gene coexpression
MR
MR Locus Description
17.4929 Ahg915255
24.8596 Ahg475310 RNA-binding (RRM/RBD/RNP motifs) family protein
28.4956 Ahg472512 Tetratricopeptide repeat (TPR)-like superfamily protein
33.4664 Ahg480234 PREFOLDIN 1
36.1248 Ahg952183 FK506- and rapamycin-binding protein 15 kD-2
39.6232 Ahg923366 elongator protein 2
49.7192 Ahg927987 Ribosomal protein L14p/L23e family protein
55.857 Ahg473244 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6
63.1823 Ahg470235 Ribosomal protein L19e family protein
68.374 Ahg484014 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression