Detail



ID : Ahg472512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472512|fgenesh2_kg.1__2466__AT1G22700.2
Sequence
TTTTATCTCT TGAGCGCACA CACACAAGAC TCCTCTCACA GAACGATTTC AATTTCATCG GAAAAAAGTT CAGTGACCCT TATGTTCGAA TCGAACATGC TTCTTCATAC ACTATCTTCT TCTTCTCCTC CACTTCACCG TCTCTATCTT CACCATTCCC AGATTCTCCC TTCTTCTGGG TCACCCAAGA AGATTTCTCT TCAGATACAT GGAAGGACTT TGGCCATTCG ATCTTTTCAT GAAATTTCTG CTAGAGGTTT ACCGGCTTTG AACAAAGCTT CCTTGAAGAA GCTACCAATC AAAGGATCCA CCTTTCTGCT GGGTCAGAGC ATGTTGATGG TTTCTGCTTA CCCACAGATG GCAGCAGCAG CAGAAATCAT AAAGCCTGAA CCGATTTACG AAGTTGGGGA GTTATTTGAA CTTAGTATTC AGCTTTCTTA CTTGCTGTTA CTACTGGGGT TGCTTGGAGT TGGTACTTTC TATGTGATCC GTCAAGTACT TGTACGCAGA GAACTTGACC TCTCCGCTAA AGAATTGCAG GAGCAAGTTA GGAGTGGCGA TGCAAGTGCA ACAGAGCTCT TCGAGCTTGG TGCAGTGATG TTGCGAAGGA AATTTTATCC TGCTGCCAAC AAGTTTTTGC AACAAGCCAT CCAGAAATGG GACGGCGATG ATCAAGATCT TGCCCAGGTC TATAACGCTC TTGGAGTGAG TTATGTCCGA GAGGATAAAC TCGACAAAGG AATCGCTCAG TTTGAAATGG CGGTGAAGCT GCAGCCCGGT TATGTAACGG CTTGGAACAA CCTTGGGGAC GCTTATGAGA AGAAAAAGGA GTTGCCTTTG GCATTGAAAG CGTTTGAAGA GGTTTTGTTG TTTGATCCGA ACAATAAGGT GGCTCGGCCT CGGCGAGATG CGTTGAAGGA TCGTGTGAAG CTTTATAAAG GCGTTGTCTC GGTTAAATCT AAGAAACGGT GACGGCTAAA ACAAGAAGAA AACTCGAACC AAGAACCGTT GGTCTTTTTC TGGCTTGGTA ATATGTAAGG AGATTTTGTG TTAATATGAA AATGAAACTT T 
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9532551.. 9534463
Download Sequence
A.thaliana
AGI-codeAT1G22700.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summaryEncodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis.
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg934672 Protein kinase superfamily protein
14.2829 Ahg472069 Protein of unknown function (DUF1637)
14.2829 Ahg488271 Pentatricopeptide repeat (PPR-like) superfamily protein
14.4914 Ahg480610 homoserine kinase
19.6214 Ahg495179 Transcriptional coactivator/pterin dehydratase
20.1494 Ahg486510 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
21.3542 Ahg930731
24.9199 Ahg946822 phosphorylcholine cytidylyltransferase2
28.4253 Ahg351421 Beta-galactosidase related protein
28.4956 Ahg489157 Protein of unknown function (DUF3353)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression