Detail



ID : Ahg489783

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489783|fgenesh2_kg.6__2917__AT4G09080.1
Sequence
ATAGAGAGAG AAAGAAGTTT AAGAGCTACA AGTTTGAAGA AATCGAGTAG AGAGAGAGAG ATCTAGATCC TTCTTCTTCT TCGTCAACCT CTAGGATACT CGTGTAGGTT ATTGTGATGG AAGCTGTGAA CGAAGCCGTG AGGAAGATTA AGTCCTTAGT CATTCCACAT TCAGATGAGA AAACTAATGG TATTGTTCTT GAGATCAAGC TTGATGAGAC AGATCAGAGA TCAGCAAAAT GGAGTCTTGA TCCTTCTTTG GCCTTGTTTG AGGTAACTGG GTCTTGTACC TTGGGACGCC AAAACTTCGA GGGCCTTAAT TGCTCTCTCA TGAGTGCTGT GACCACTAGC AACATCTTCG ATCCTAAGCT GGATGATCTT TTGTCTAAGC TTGAGTATGT ACGGTGTCTA GACGGTGATA AAAATCCTAG AAACCGTACC TTCAAAACGA GCTTCTTCAA CAGCAGAAAA CTTAGCCCTG TGTTCACTGG GGGACCAGGC TTTGAGGAAG TAGTGCCTCC AATGTTTCTG GCTCGAGATT GTCTTAAAGC TACTATAACT GAGAACTTAA CCCGTCAGAG AGAATTCACA TATGGAGTTA TGTTGGAAGA GATAATAGCC CAAGATGAAA ACAGGAAAGT CTCTGTAAAT GGGCTGTCGT TTTCGCCTAG CGGTGGAATC AGTGTTAATG GACCTCCAAC AACTCTAAGT GGTACTGGTA TTGACCGCAT AGCCTCTCTA CAAGCCAACA TAACCCGAGA CAACACCAAG CTTGTGAATG GGGCTATTGT TGGAGAGAGG AATGTCTTTC AGGTGGATCA AGGCTTGGGT ATAGGAAGCA ATTTCCCGCT CTTCAACCGC CATCAACTAA CACTTACAAG ATTCATTCAG CTGAAGCAAG TAGAAGAAGG ATCCGGTAAT CCACGACCAC CAGTTCTAGT CCTCCACGGT CATTACGGTG GCTGCATAGG CGATCTTCCA AACTATGATG CTTTTGCTCT TGGTGGACCT AACTCTGTTC GAGGCTACAG CATCGGAGAG CTCGGTGCAG CTAAACACAT TCTCGAGCTT AGTGCTGAGA TTAGAATCCC TGTGAAGAAC ACACATGTTT ATACATTTGC TGAGCATGGA AACGATTTGG GAAGTTCAAA GGATGTGAAA GGGAATCCGA CAGCGGTTTA CCGGAAAATG GGACATGGTT CATCGTACGG TTTGGGTGTG AAACTCGGTA AGGTGCGAGC TGAATATACT GTACGTCACA ATCGTGGAAC CGGTGCTCTG TTTCTCAGGC TCGGAGAGAG ATACTAAAGT GATGCCCTGA AGACTTTGTG CTCCTTCCTT TCTTAACTCT AATACTTTGG TTTATAATCC TGATACTCTA GTTATGTAAA TGCGTGCATA GCAAGTCATT GAGTTTAAGC AT 
Length1422
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18129687.. 18132087
Download Sequence
A.thaliana
AGI-codeAT4G09080.1
DescriptionOuter membrane OMP85 family protein
TAIR curator summaryComponent of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts.
Alias[ATTOC75-IV][TOC75-IV][TRANSLOCON OUTER MEMBRANE COMPLEX 75-IV][translocon at the outer envelope membrane of chloroplasts 75-IV]
Gene coexpression
MR
MR Locus Description
24.2487 Ahg897788 Metal-dependent protein hydrolase
36.8782 Ahg322019 RNA-binding ASCH domain protein
44.9889 Ahg894823 villin 3
51.7301 Ahg934176
59.5483 Ahg475070 Copper amine oxidase family protein
68.1542 Ahg497391 Protein of unknown function (DUF1313)
75.379 Ahg352314 Copper amine oxidase family protein
81.5843 Ahg333276 Subtilase family protein
84.7467 Ahg920352 Mitochondrial substrate carrier family protein
85.7205 Ahg470369 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression