Detail



ID : Ahg489952

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489952|fgenesh2_kg.6__3086__AT4G11140.1
Sequence
ATGGAGACAG CGAAGAAAGT TTCTCTCCCA AGAATCTTAC GAATCTCTGT TACTGATCCT TACGCTACAG ATTCATCAAG CGACGAAGAA GAAGAAGATG GTTTTGAAGC AATCACTAGA AAACGACGTC GTGTTAAGAA ATACGTGAAC GAAGTGGTTC TTGAATCGGT TTCTGATAAA GGAAAGCCGA TGAAGAAGAA GAGAAAGAAG AGTGTAGCTA CTGCTCCGGT GGTTGTTACG GCGGCGGCGA GGAAGTTTCG TGGAGTGAGA CAAAGACCTT GGGGAAAATG GGCGGCGGAG ATTAGAGATC CTAGTAGACG TGTTAGGGTT TGGTTAGGTA CTTTTGACAC GGCGGAGGAA GCTGCCATTG TTTACGATAA CGCTGCTATT CAGCTACGTG GTCCTAACGC GCTGCTTAAC TTCTCTCCTC CTCCGGTGAC GGAAAATGGT GAAGAAGAAG CTTCGACGGA GGTGGAAGAA ACTTCGGGTT TAATCAGTGG TGGTGGTGGA TGTCTTCATT CGCCGGTTTC TGTTCTCCAC TCTCCGTTCT CCGGTGAGTC TACGGCGAAG ATTGGGGTGA AAGAGGAAGT TTCCGGCGTA TCGACGGCGG AGATTGTGGT TAAAGAGGAG CCGTCCTTTA ACGTCTCGGA TTTCTCGGCG CCGTTGTTCT CGGACGACGA CGTGTTTGGT TTTCCGACGT CGATGAGTGA TTGTTTCGGC GGCGATTTAT TCGGAGATAA CCTTTTTGCG GATATGAGTT TTGGATCCGG GTTTGGGTTC GGGTCTGGAT TCTCCAGCTG GCACGTGGAG GACCATTTTC AAGATATTGG GGATTTATTC GGGTCGGATC CTCTCTTAAC TGTTTAACGG CGTTTAGTGA AGTTTTGTTA CCGGCGACGG CGAGGATATA AAAATATCGG CGATTTTTTT TTTATAAATG AAGATTTGTT ATATATATTA AAGTTTTAAA CTTAATTAAT GGTGATTTTT TTT 
Length993
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19621285.. 19622567
Download Sequence
A.thaliana
AGI-codeAT4G11140.1
Descriptioncytokinin response factor 1
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).
Alias[CRF1][cytokinin response factor 1]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg470669 glucan synthase-like 7
18.7083 Ahg490604 SKU5 similar 9
22.0907 Ahg925485 DNA-directed RNA polymerase family protein
27.9285 Ahg925981
35.8887 Ahg474990 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
39.4715 Ahg473289 Subtilase family protein
44.5646 Ahg925484 RNA polymerase subunit beta
53.963 Ahg470863 Tetratricopeptide repeat (TPR)-like superfamily protein
57.9137 Ahg476492 Auxin efflux carrier family protein
73.4847 Ahg925489 ATP synthase subunit C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression