Detail



ID : Ahg490604

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490604|fgenesh2_kg.7__37__AT4G38420.1
Sequence
TCTTCTTCTT GTCAAAGCGA GTATGGGCTG GTGGCTAAAT GGCGCCGTTT GTACGATGAT GATGGCCATA TCCACCATTT CTTTTGTTCA AGCTGATGAT CCCTACCGTT TTTTCGACTG GAGGGTCACT TACGGCAACA TTTCTCCACT TGGCATTCCT CAAAGGGGAA TCCTGATTAA CGGACTATAT CCTGGACCCG ATATTTACTC CGTCACCAAC GACAATTTGA TCATCAATGT TCACAACGAT CTTGACGAAC CCTTTCTCTT ATCTTGGAAC GGAGTGCAAC TGAGGAAGAA TTCTTACCAA GATGGAGTGT ATGGGACGAC TTGTCCAATC CCACCGGGCA AAAATTACAC TTATGCCATC CAAGTCAAAG ACCAGATCGG TAGTTTCTTC TACTTCCCTT CCCTCGCCGT TCACAAAGCC GCCGGTGGTT TTGGCGGTTT CCGTATCCTC AGCCGCCCTC GCATCCCCGT CCCTTTCCCT GAACCCGCTG GAGATTTCAC CTTCCTCATT GGTGATTGGT TTGAGCATGA CCACAAGGCT TTGAAGGCAA TTTTGGATAG AGGACACAAG CTACCTTTGC CTGAAGGGGT TTTGATCAAT GGCCAAGGAG TCAGTTACAT TTCTTCACTT ACAGTCCACA AAGGTAAAAC ATACAGATTT AGAATATCGA ATGTAGGGCT TCAAAACACT CTGAATTTTA GAATCCAAGG TCATCAGATG AAGCTCGTCG AGGTTGAGGG AACCCATACC ATACAGTCCA TGTATACCTC TCTCGACATT CACGTTGGAC AGTCTTACTC CGTCTTGGTC ACCATGGACC AGCCTGACCA AGACTATGAC ATTGTCGTCT CCACAAAATT TGCCGCCAAA AAACTCTTGG TCTCATCCAC TATCCACTAC TCCAACTCAA GACATAGCCG CCACTCATCG TCTGCTAATT CTGTCCATGC TGAGCAACCT GCCGATGAAC TAGATTGGTC TATCAAACAA GCCCGGTCCA TTAGAACCAA TCTAACCGCG TCTGGGCCAA GGCCTAACCC TCAGGGCTCG TACCACTATG GTCGAATCAA GATTTCTAGG ACTTTAATAT TGGAAAGCTC AGCGGCACAA GTGAGGAGGA AGCAACGCTA CGCCATAAAC GGAGTGTCGT TTGTAGCTGC AGATACTCCG CTAAAGCTTG CAGATTACTT CAAGATCAAA GGCGTTTTCA AAGTGGGAAG CATCCCTGAC AAGCCGAGAA GAGGGGGAGG GATGAGAATG GAGACGTCAG TGATGGGAGC ACACCATAGA GACTTCCTTG AAATCATATT TCAAAACCGC GAGAAGATTG TCCAAAGTTA CCACCTCGAT GGATATAGTT TTTGGGTTGT CGGGATGGAT AGAGGAACAT GGTCGCAAGC GAGTAGACGA GAGTATAATC TCAGGGATGC TATTTCTCGC TCCACCACTC AGGTATATCC AGAATCTTGG ACAGCCGTAT ATGTAGCACT GGACAATGTG GGGATGTGGA ATCTAAGGAC TGAATATTGG GCGAGGCAAT ACTTAGGCCA ACAATTCTAC CTCCAAGTTT ATTCTCAAAC ACACTCTCTT AGAGATGAAT ATCTTTTGCC TAAGAATGCT TTGTTGTGTG GCCGAGCCTC CAGTAAACAC ACTCCCATTA CCACTCCTTA ATGACTCTAT ATGTTGAGTT CTTTATTCTT TATATTTCGA TAGCGAGATA TATGTTGCAC AATTATTAAT CTACTACATA AATTGTAATG TACACCCAAA TTTGATGAAA ATTTTACTGT TTTGTAA 
Length1807
Protein Sequence
Protein Residue
Map Locationscaffold_7: 96751.. 99493
Download Sequence
A.thaliana
AGI-codeAT4G38420.1
DescriptionSKU5 similar 9
TAIR curator summary
Alias[sks9][SKU5 similar 9]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg495722 expansin A14
7.07107 Ahg919287 RAB GTPase homolog A5E
8.83176 Ahg490743 gamma-glutamyl transpeptidase 1
10.9545 Ahg473304 FAD-binding Berberine family protein
18.7083 Ahg489952 cytokinin response factor 1
18.735 Ahg913177 Leucine-rich repeat (LRR) family protein
21.6333 Ahg942207 Mitochondrial substrate carrier family protein
23.3666 Ahg490494 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
26.8328 Ahg494579 FASCICLIN-like arabinogalactan protein 13 precursor
28.1957 Ahg949430 beta-xylosidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression