| Annotation |
|---|
| Description | jgi|Araly1|490058|fgenesh2_kg.6__3192__AT4G12570.1 |
| Sequence |
CTGTGTTAAA CCCAGACGAA ACCTCCGATC TTCTTCTCCT CTCCAATCTC TTCATCTTCC TCCTCCTCCT CCTCACCTCT GTACTCCGTT ACGGTTAATT TTCCGGCGAA ATCGATTTGG ATAAGGTTTT GGCGAAAAAC CAGAACCGAT AGAGATAGAG AGAGAGATTC TCGTCGCTCG ATGACTCTAA GCCGTTCATC AGCCGCCGAT TCAACCAATA ACTCTAACCG ATCTTACTCC GCCGTGGCTG GAACCGATCA TAAACGGAAA CTAGACGATT ACGACGCTTC GTCGTCTCCT GATTACGTCG GCGTTGTTGA TTTTCTCCAG AAAATGAAGA AACACGAAAT TGACGCCGAT CATATGGCTG CGTCGGCTCA ACAGACTTTG ATTTCGTGGA GATCCGGTGA GAATTCCGGA TTTAATCGGT CTTTATCTTC TTCCGGCGAG TGTTCTTCGT CGAATCGTCC TGAGTCGACT CGGTTACAAA TCTTTGTGAG GATGATGTCT GGAGGTAAAA CGATTGTGAT CCACGCTGAT AAAAACGATA CTGTTGAGAA GCTTCATGAG AGAATCGAGT GGAAAACGAA GATTCCGGTG AGTGAGCAAC GAGTTATCTA TAAAGGTAAG CAGTTACAGT ATGAACACTC GCTTGCTTAC TACTCGATCG AGCAAGACGC TTCGCTTCAG CTCGTTGGTA GGATGCAGAG CACAGAGCAT CCTGTAGCTT GGCAAACGAT TGATGATATT ATGTACACAA TTTCGAGAAT GTATAAAGGT GAGAATCTTC AATCTAACAT AAATGAGAAG ATTGTTACTT TCTTCGCGAT GATTCCTGTG GAGAACGATG AATCGATTGC GAAATATTTG AAGATTTTCT CGAACTCTTC GGTTCCAGCT GCTTTAGTGA TGCTATATGC TTCTTCTTTA GAGAGGAATA AGTCTTGTGC TAAGAGTTCT GTTAAGCTGT TTTTGAGTAG CTGCGTAGCC TTGCCGAAGA ATCAGCAGAA CTATTGTTTA CCGATAGTGT TAGAGTTTTG TAAAATTCTT AGGAAAGTTT GCCCTGATCA GAAGCTATAT GTTACTTGCC GGAACACCTT GGGATCAATG CTGGAGACGT TTGATAACCC TCGTGGTGTA TTTAATGATG GATATTCGAC TTTCGGGGTG GAGATTTTCC CCTTCTTTAC CGAGTTAACT GGTCTTTTGG TGAATGAGTT AGTCCAGAAT TCAGGTCCAA GTTTCTGTGA CTTTCATAAA TTTTCTTCCT TTTGGCAACA GTTGAGGAAG GCCATTGAAT TCAAAGATGC TGACTCGATT CCCAATGTTT TACCTCCGCG AAGTACTCCA TTGGAAGCGG AGATCAGACA TCTTCATCAG TTATTTGGAA GCTTGTTGAC GACAATGGAC CTTTGTATGT GTAGGGTTGA GTCTGACAAA GAAGTTGGAA ACAGTGAAAC TGTATCTTCA TCGTGGTCTC AATATCTATC CATTCTGAAG ATTATCAATT CAATGTCTAA CATCTATCAA GGTGCTAAGG GACAGCTAGC TGTTATGTTA AATAAAAATA AGGTTTCATT CTGCGTCCTC CTTGTGAAAT TTGCTAAAAG AGGAGATGAC CACCAATGGG TCTTTGAGTA TAAGGAAGCT ACCAACTTTG AAGCTAGGAG GCATTTGGCA ATGCTGTTGT TTCCTGACGT GAAAGAAGAC TTTGAGGAGA TGCACGAAAT GCTCATTGAT CGGTCCAATT TGCTATCAGA ATCGTTTGAG TACATAGTGG GCGCAAGCCC TGAAGCACTT CATGGTGGAC TGTTCATGGA ATTCAAGAAT GAGGAAGCTA CAGGTCCTGG TGTTCTACGA GAATGGTTCT ATCTGGTATG TCAGGAGATA TTCAATCCAA AAAATACCCT CTTTCTTCGA TCTGCTGATG ATTTTAGAAG ATTCTCTCCA AACCCAGCAT CCAAGGTGGA TCCATTGCAT CCTGATTTCT TCGAGTTCAC CGGTCGTGTG ATTGCCTTAG CTTTGATGCA CAAAGTTCAA GTGGGTGTGC TGTTCGATCG TGTTTTCTTC TTACAATTGG CTGGACTGAA AATTTCTTTG GAAGATATTA AGGACACCGA TCGAATTATG TACAATAGCT GCAAACAGAT TCTGGAAATG GATCCAGTGT TTTTCGATTC AAACGCCGGC CTTGGTCTAA CATTCGTGTT GGAAACCGAG GAGCTGGGAA AGAGGGATAC AATAGAGCTA TGTCCAGGCG GGAAATTCAA GGCTGTCAAC AGCGAGAACA GGAAACAATA TGTCGATCTC CTTATCGAAC GCCGATTTGC CACACCAATC TTTGAGCAAG TAAAACAATT TTCCCGAGGT TTCACTGATA TGCTTTCGGA TTCTGTACAG CCCAGATCCT TTTTCAAGAG ATTATACCTA GAGGATCTCG ACGGAATGCT TCGAGGAGGA GAAAACCCGA TAAGCATAGA TGATTGGAAA GCACACACAG AATACAACGG ATTCAAAGAG ACCGATCGCC AAATAGACTG GTTCTGGAAG ATTCTGAAGA AAATGACAGA AGAAGAACAG AGGAGTATAC TGTTCTTTTG GACATCGAAT AAGTTTGTAC CGGTGGAAGG GTTTAGAGGA TTATCATCAA AGCTTTATAT CTACAGATTA TATGAAGCTA ATGATCGTCT TCCATTGTCT CATACTTGCT TTTACCGTCT CTGTATACCA AGATACCCGA CGATGACTCT CATGGAACAA CGCCTCCGAC TCATCGCTCA AGATCATGTC AGCTCCAGTT TCGGTAAATG GTGAAATAAT TATCAAAGTA ATCTCTATCT TCAATCTGAT CTTTAGGGTT CGTAGATTGG TGCTTTTGGT GTATAGATTT AGCGTTATGG TCAAGCCTCT GTTTATGACC GAAAGATTTC TTAACTTCTG TTTTTAACTT ATGGATAAAT TA |
| Length | 2962 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 20876942.. 20880526 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G12570.1 |
| Description | ubiquitin protein ligase 5 |
| TAIR curator summary | Knock-out mutants showed accelerated senescence of leaves. |
| Alias | [UPL5][ubiquitin protein ligase 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.59166 |
Ahg936076 | GDA1/CD39 nucleoside phosphatase family protein |
| 14.4914 |
Ahg940592 | DEAD/DEAH box RNA helicase family protein |
| 18.9737 |
Ahg340533 | cationic amino acid transporter 4 |
| 29.9333 |
Ahg481908 | alternative NAD(P)H dehydrogenase 2 |
| 30.0167 |
Ahg475187 | S-locus lectin protein kinase family protein |
| 45.3652 |
Ahg477535 | RING/FYVE/PHD zinc finger superfamily protein |
| 46.0543 |
Ahg919449 | UDP-glucosyl transferase 71C4 |
| 48.8672 |
Ahg494587 | Calcium-binding EF-hand family protein |
| 52.1153 |
Ahg934940 | phosphatidylinositol- 4-phosphate 5-kinase 5 |
| 52.9906 |
Ahg944988 | auxin response factor 16 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|