Detail



ID : Ahg940592

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940592|scaffold_601136.1
Sequence
TGTGTTTATA AAACTTGTGA AGTATGGGAG ATGCTAGAGA CAACGAAGCC TATGAGGAGG AGCTTTTGGA CTACGAGGAA GAGGACGAGA AGGTCCCAGA TTCTGGAAGT AAAGTTAATG GCGAAGCCGT GAAAAAAGGC TACGTGGGAA TACACAGTTC TGGATTCAGA GACTTCCTTT TGAAACCGGA GCTTCTCAGA GCCATTGTTG ACTCAGGATT TGAACATCCA TCTGAAGTGC AACATGAATG TATCCCTCAA GCTATCTTGG GCATGGATGT TATCTGCCAA GCAAAATCTG GTATGGGAAA GACTGCTGTG TTTGTGCTTT CGACTCTACA ACAGATCGAG CCATCTCCTG GCCAGGTTTC TGCTCTTGTC TTGTGTCATA CAAGAGAGCT AGCTTACCAG ATCTGCAATG AGTTCGTGCG ATTCAGTACC TATCTGCCTG ATACAAAGGT TTCGGTGTTC TATGGTGGAG TCAACATTAA AATTCACAAA GACTTGCTGA AGAATGAATG TCCTCACATT GTTGTTGGTA CACCTGGTCG GGTGCTTGCA CTCGCCAGGG ACAAAGATCT CTCTTTGAAG AATGTGAGGC ATTTTATTCT TGACGAGTGT GATAAAATGC TCGAGTCACT TGACATGCGG AGGGATGTGC AGGAGATTTT TAAGATGACT CCTCATGACA AGCAAGTAAT GATGTTCTCA GCTACGCTCA GCAAAGAGAT ACGTCCAGTC TGCAAGAAAT TTATGCAAGA TCCAATGGAA ATATATGTTG ATGATGAAGC CAAGTTGACT CTTCATGGAC TTGTCCAGCA CTACATCAAA CTGAACGAGA TGGAGAAAAA CCGCAAGTTG AATGACCTTC TGGATGCATT GGACTTCAAT CAAGTTGTCA TATTTGTGAA GAGCGTGAGC AGAGCTGCGG AGCTGAACAA GTTGCTGGTG GAATGCAATT TCCCCTCAAT ATGTATCCAC TCTGGCATGT CTCAAGAAGA GAGGTTGACT CGCTACAAGA GTTTCAAGGA AGGGCACAAG AGAATACTCG TGGCGACTGA TTTGGTTGGA AGAGGCATTG ACATTGAGCG TGTCAACATT GTTATCAACT ATGACATGCC AGATTCTGCA GATACATATC TTCACAGGGT TGGGAGAGCT GGTAGATTTG GAACAAAGGG TCTAGCAATC ACATTTGTTG CATCAGCCTC AGATTCTACT GTTCTTAATC AGGTACAAGA GAGGTTTGAG GTTGATATAA AGGAACTTCC TGAGCAGATT GATACATCTA CTTACATGCC GTCTTAAAGT AGTCTTCGTC TCTCAGG 
Length1327
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4316896.. 4319958
Download Sequence
A.thaliana
AGI-codeAT5G11170.1
DescriptionDEAD/DEAH box RNA helicase family protein
TAIR curator summary
Alias[UAP56a][homolog of human UAP56 a]
Gene coexpression
MR
MR Locus Description
1 Ahg484223 ATP/GTP-binding protein family
7.93725 Ahg489475 TCP-1/cpn60 chaperonin family protein
10.2956 Ahg941643 TCP-1/cpn60 chaperonin family protein
10.5357 Ahg950810 glycerol-3-phosphate acyltransferase 9
12.7279 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
14.2829 Ahg485357
14.4222 Ahg495615 DNA topoisomerase I alpha
14.4914 Ahg490058 ubiquitin protein ligase 5
14.7309 Ahg478222 mRNA capping enzyme family protein
16.3095 Ahg470391 Transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression